Pairwise Alignments

Query, 252 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 249 a.a., Transcriptional regulator, AraC family from Pseudomonas sp. S08-1

 Score =  292 bits (748), Expect = 4e-84
 Identities = 149/249 (59%), Positives = 183/249 (73%)

Query: 1   MRPILTLRQYTHDLIVHSHDHAQLVFGLSGALDFEVEGHGSQVVQQSFVVVPSGAHHACD 60
           M+ +L+LR Y H+ I HSH+HAQLVFGLSG LDFEV G G QV   S  VVP GAHHAC 
Sbjct: 1   MQQLLSLRHYHHEQIAHSHEHAQLVFGLSGQLDFEVGGRGCQVSSLSLAVVPPGAHHACA 60

Query: 61  SAHGSRCLVLDVPSDQWVSQSLGDHAEASRRLLDNAGRLSLDAGQSQLVSWLAGSQISDP 120
           S  GS+CLVLDVP D W+ Q LG HA+ASRRLL+  GRL LD  Q QLV+WLA S I+D 
Sbjct: 61  SPLGSQCLVLDVPMDGWLQQRLGHHADASRRLLERPGRLQLDPAQGQLVNWLAASPINDE 120

Query: 121 LIAQQGAVLLLASLNNTKPDSVGGRRLPYAALNAHIDQYAAYPLQVADLARIAGLSSARL 180
           +I QQGA LLLASL+N    +     LP A ++A+I+++ A+PLQVADLAR+ GLS+AR 
Sbjct: 121 VIGQQGAALLLASLSNAAAPAPITLGLPLARIDAYIERHCAHPLQVADLARLCGLSAARF 180

Query: 181 HARFVAECGQTPMDYIRSRRLHIAVGLLRDSALPIGEIACRVGYSSQSAFAAAVLREFGA 240
           HARF+AE G TPM+++R+ RL +    L  S LP+GEIA RVGY SQSAF AA++REFG 
Sbjct: 181 HARFLAETGHTPMEHVRALRLQLGRRWLLQSRLPVGEIAARVGYDSQSAFTAALVREFGL 240

Query: 241 SPGKLRREA 249
           +P +LR  A
Sbjct: 241 TPRQLRTSA 249