Pairwise Alignments

Query, 252 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 250 a.a., Transcriptional regulator, AraC family from Pseudomonas sp. S08-1

 Score =  112 bits (281), Expect = 6e-30
 Identities = 85/237 (35%), Positives = 123/237 (51%), Gaps = 12/237 (5%)

Query: 17  HSHDHAQLVFGLSGALDFEVEGHGSQVVQQSFVVVPSGAHHACDSAHGSRCLVLDVPSDQ 76
           H+HD+ QLV  LSG  +FEV G G +V +    +VP  A H       +R L+LD+    
Sbjct: 16  HAHDYHQLVMSLSGRAEFEVSGRGGEVSRMRACLVPGDADHQFAGMGDNRMLILDLDERD 75

Query: 77  WVSQSLGDHAEASRRLLDNAGRLSLDAGQSQLVSWLAGSQI----SDPLIAQQ-GAVLLL 131
              + L   AE    L ++    +LDA    L+S+ AG+++    SDP +A+  G VLL 
Sbjct: 76  TSPEDLSLLAE----LFESPRYPTLDADFQNLLSY-AGAELARYGSDPHLARALGGVLLR 130

Query: 132 ASLNNTKPDSVGGR--RLPYAALNAHIDQYAAYPLQVADLARIAGLSSARLHARFVAECG 189
           A       +S  G    L    L+A+I ++ A  + V +LA++A LS +  HA+F    G
Sbjct: 131 ALHLRLFGESGRGAIANLDLGRLDAYIAEHLARRITVIELAQVACLSPSHFHAQFKDSVG 190

Query: 190 QTPMDYIRSRRLHIAVGLLRDSALPIGEIACRVGYSSQSAFAAAVLREFGASPGKLR 246
            TP  Y+   RL  A  LLR+S L +  IA   G+SSQSA   A+ R  G +P +LR
Sbjct: 191 LTPHQYLLKARLDHAARLLRESPLALVRIAEECGFSSQSALTTAMRRYMGLTPKRLR 247