Pairwise Alignments

Query, 252 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 244 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 21/250 (8%)

Query: 7   LRQYTHDLIVHSHDHAQLVFGLSGALDFEVEGHGSQVVQQSFVVVPSGAHHACDSAHGSR 66
           +R Y  +     H   Q+V  +SG L  +V G   ++     V +   A H  ++   + 
Sbjct: 8   IRTYRQERPRERHGFVQIVLPVSGHLRIDVAGRQDELSTGRGVFIHRDAPHTQEATDINH 67

Query: 67  CLVLDVPSDQWVSQSLGDHAEASRRLLDNAGR---LSLDAGQSQLVSWLAGSQISDPL-- 121
            LV+D+           D +  S R L+   R   L +     QL++++ G   +D    
Sbjct: 68  SLVVDI-----------DESVVSERTLEKFARTPFLDIAPDTRQLITYMRGVIGTDGRRD 116

Query: 122 -IAQQGAVLLLASLNNTKPDSVGGRRLPYAALNAHIDQYAAYPLQVADLARIAGLSSARL 180
            +    A LL+ SL N + D    +RL +  L A +     +P  +  LA  A +S +RL
Sbjct: 117 DVTGLWAPLLVDSLANERADI--RKRLRW--LGAVVGAEPFFPWTIDMLAACASISESRL 172

Query: 181 HARFVAECGQTPMDYIRSRRLHIAVGLLRDSALPIGEIACRVGYSSQSAFAAAVLREFGA 240
           HA F+ E G +P  ++   R+     LLR+S+LPI EIA R G+S Q+A   A+    G 
Sbjct: 173 HALFIEEFGLSPHRWLVGLRMDKVCTLLRESSLPIAEIALRSGFSDQTALTRALRNAVGE 232

Query: 241 SPGKLRREAG 250
           +P   RR  G
Sbjct: 233 TPAAYRRNRG 242