Pairwise Alignments

Query, 310 a.a., Chemotaxis protein CheV (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  183 bits (465), Expect = 4e-51
 Identities = 101/283 (35%), Positives = 162/283 (57%), Gaps = 5/283 (1%)

Query: 20  LELLLFRLDGQQLYGINVFKVREVLQCPKLTLMPKSSPVVCGVANIRGATIPILDLAMAT 79
           L LLLF L   +L  IN+ KV E++ CP L  +P+S P V G+A +RG ++ ++DL+ A 
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRAL 70

Query: 80  GSGALKDQSNPFVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGRDH-YLTAVTR 138
           G   L D     +I+T+ +   QG  V++V +IV+    +I PPP G+G +  ++T VT+
Sbjct: 71  GEMPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFITGVTQ 130

Query: 139 VDNQLVEIIDVEKVLAEVSPTPEAISVGVVDVDTQHKALSLRVLTVDDSSVARKQVTRCL 198
           V+  LV+++D+EKV+  ++P P   +   + ++      + R+L VDDS VA +Q    L
Sbjct: 131 VEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNARILVVDDSQVALQQSVHTL 190

Query: 199 QTVGVEVVALNDGRQALDYLRKLVDEGKKPEEEFLMMISDIEMPEMDGYTLTAEIRSDPR 258
           + +G+        ++A+D L +L    +   E+  +++SDIEM EMDGY LT  +R  P 
Sbjct: 191 RNLGLTCHTARSAKEAIDVLLEL----QGTVEQINVVVSDIEMSEMDGYALTRTLRETPD 246

Query: 259 MQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVV 301
            Q L+++LHTSL    N    +  GAD  L KF   +L   +V
Sbjct: 247 FQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLV 289