Pairwise Alignments

Query, 229 a.a., ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data) from Pseudomonas fluorescens FW300-N1B4

Subject, 242 a.a., Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) from Pseudomonas fluorescens GW456-L13

 Score =  214 bits (546), Expect = 9e-61
 Identities = 107/226 (47%), Positives = 157/226 (69%), Gaps = 1/226 (0%)

Query: 2   LKGYGAVILDGVWLTLQLALSSMVLAIVLGLIGVALRLSPIRWLAWLGDLYSTVIRGIPD 61
           LKG+G ++L G W+T++L+   +++++ LGLIG + +LS    L      Y+T+IRG+PD
Sbjct: 16  LKGFGPLLLQGSWMTVKLSFLCLLVSVGLGLIGASAKLSKSALLRVPAQAYTTLIRGVPD 75

Query: 62  LVLILLIFYGGQDLLNRVAPMFGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIP 121
           LVL+LLIFY  Q  L  +    G+D YI++NP +AG+ TLGFI+GAY +ETFRGA +A+P
Sbjct: 76  LVLMLLIFYSLQTWLTSLTEALGWD-YIEINPFSAGVITLGFIYGAYFTETFRGAILAVP 134

Query: 122 KGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKA 181
           +GQ EA  AYG++  Q F  V+ PQM+R A+PG  NNW+V+ KATAL+S++GL D++  A
Sbjct: 135 RGQMEAATAYGLTRAQRFRLVVFPQMMRFALPGIGNNWMVILKATALVSIIGLADLVKVA 194

Query: 182 KQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAA 227
           + A  ++ + F F +  A +YLVIT+VS   LR +E  Y+ G R A
Sbjct: 195 QDAGKSSYQLFFFLILAALIYLVITTVSNYVLRRMEIFYAAGTREA 240