Pairwise Alignments

Query, 427 a.a., Sialic acid transporter (permease) NanT from Pseudomonas fluorescens FW300-N1B4

Subject, 405 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  146 bits (369), Expect = 1e-39
 Identities = 103/400 (25%), Positives = 186/400 (46%), Gaps = 11/400 (2%)

Query: 20  WYHNINKQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAMWGITTGEAGLIHTSTLIASA 79
           WY  +N  +R+  +S  +GY  DG D  M+ +++  + A  GIT  +A LI T   IA  
Sbjct: 5   WYKQVNPPQRKALFSAWLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAFIARP 64

Query: 80  IGGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYEQLLISRTLMGFGFGGEWTAG 139
           IGG   G ++D+ GR   +   +  ++  T L G A N   L + R ++G G  GE+   
Sbjct: 65  IGGGFFGAMADKYGRKPMMMWAIFIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGEYACA 124

Query: 140 AVLIGEVIRAKDRGKAVGMVQSGWALGWGLTAILYALLFSVLPPEDAWRALFLLGIVPAI 199
           +    E      + KA   + SG+++G     I+ A +         WR  F +G++P +
Sbjct: 125 STYAVESWPKNLQSKASAFLVSGFSVG----NIIAAQIIPQFAEVYGWRNSFFIGLLPVL 180

Query: 200 FVIFVRRLVKDPEIYREAKAKQEPSNPAKFYEIFAPGILFTTIRASILTTGALGGYYAIT 259
            V+++R+   + + + E K K +    + F  +F    L  ++   ++     G  + I 
Sbjct: 181 LVLWIRKSAPESQEWIEDKYKDK----STFLSVFRKPHLSISMIVFLVCFCLFGANWPIN 236

Query: 260 SWLPTFLKNERGLSVLGTGGYLAMVIVGSYVGYVISAYLTDILGRKKNFILFAVGSFTIV 319
             LP++L  + G++ +     + +  +G+  G +   ++ D +G KK F++  + SF  +
Sbjct: 237 GLLPSYLA-DNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDKIGVKKAFVVGLITSFIFL 295

Query: 320 LLYTQLPVSNGVMLWLG-FPLGFFASGIFSGMGAFLTELFPTRIRGSGQGFCYNIGRALA 378
                + V N  ++ L  F L F   GI   +  F+ + FPT++RG G G  YN+G    
Sbjct: 296 CPLFFISVKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPTKLRGLGTGLIYNLGATGG 355

Query: 379 ALFPLLIGLLSQKVPLSVGIG-AFAAVSYGVVILAALSLP 417
              P+L   +S    L V +     A S  +++L    +P
Sbjct: 356 MAAPVLATYISGYYGLGVSLFIVTVAFSALLILLVGFDIP 395