Pairwise Alignments

Query, 488 a.a., Alternative cytochrome c oxidase polypeptide CoxM (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 342 a.a., Heme/copper-type cytochrome/quinol oxidases, subunit 2 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  162 bits (410), Expect = 2e-44
 Identities = 90/248 (36%), Positives = 138/248 (55%), Gaps = 16/248 (6%)

Query: 27  PAASNWGSIDTTLF-ITLIISGIFFIAITVFMAVAVMRYRHKEGSRAHYQPESKKLETWL 85
           P AS  G +   LF +T+ I+G+ FI   + +     RY++KE ++A Y PE+ KLE   
Sbjct: 74  PIASEHGVVTDNLFWVTMAITGVVFIITHILLFWFSYRYQYKENAKASYFPENNKLEVIW 133

Query: 86  IIVTSIGIAAMLAPGLVVYSDFIN-VPKNAYELEVVAQQWQWAFRFAGQDGKLGKSDIKF 144
             V ++ +  ++  G   +SD     P+NA+ +EV+  Q+ W FR+ G+D +LGK D + 
Sbjct: 134 TAVPALVLTVLIVYGWKSWSDITAPAPENAHVVEVMGYQFAWEFRYPGKDQQLGKYDYRL 193

Query: 145 VDFTNPLGLDPKDPVGQDDVLIKSNEVRLPLDQPVKVLLRSKDVLHNFYIPQIRSKMDMV 204
           ++ +N  G+D  D    DD    + +V +P  +PV   +RS+DVLH+ + P +R KMD V
Sbjct: 194 INPSNSRGIDFTDKNALDD--FPAQKVVIPKGEPVLFKIRSRDVLHSVFAPHMRLKMDAV 251

Query: 205 PGMVSYFWFTPTKTGK------------YEILCAEYCGLGHYNMRGQMIVEEQGAFDQWL 252
           PGM + FWF PTKT              YEI C E CG GH++MR ++ V E   + +W 
Sbjct: 252 PGMPTRFWFVPTKTTAEMRAELGDEEFVYEIACTEVCGGGHFSMRREIEVVEPEEYQKWF 311

Query: 253 NSQPTFAQ 260
             Q TF +
Sbjct: 312 AEQQTFIE 319