Pairwise Alignments

Query, 304 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 6e-30
 Identities = 72/245 (29%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 2   MTLRQIRHFIAVAETGSISAAAQTAFISQSTLTLAIQQLEQEIGVGLFNRHAKGMTLTHQ 61
           M L  +  FIA+AETGS S A +   ++Q  ++  I  LEQ++ V LF+R  + + LT  
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 62  GHQFLRQAHLILATVDNAKRSLQQSTDQVAGQLIIGVTSLVAGYYLADLLTRFQRAYPNV 121
           G   L +A+ IL  +D+ +R+L   T +V+G+L +  +  +  + L  +L  F R YPNV
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120

Query: 122 --EIRVMEDERPYIEHLLVSGEIDVGVLILSNLEDRHALQTEVLTHSPHRLWLPAQHPLL 179
             +I+ ++ E  Y E  ++ G  +V V+ L+  +  + ++   +   P    +  +H L+
Sbjct: 121 ALDIQFLDSEVAYEE--ILHGRAEVAVITLAP-DPHNLVRATPVWDDPLDFVVAPEHSLI 177

Query: 180 EHDSINLADVAREPLIQLNVDEMDRN-AQRMWSAASLQPRITLRTASTEAVRSLVAAGLG 238
            + S++LAD+A  P +    +    +   R++ A  L P I + T   E ++ +V+ GL 
Sbjct: 178 SNGSVSLADIAGHPAVFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLA 237

Query: 239 VSIQP 243
            S+ P
Sbjct: 238 WSVLP 242