Pairwise Alignments

Query, 304 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  116 bits (290), Expect = 7e-31
 Identities = 88/276 (31%), Positives = 136/276 (49%), Gaps = 9/276 (3%)

Query: 4   LRQIRHFIAVAETGSISAAAQTAFISQSTLTLAIQQLEQEIGVGLFNRHAKGMTLTHQGH 63
           LR +R+F+AVAE      AA    ISQ  L+  IQ LEQ+IG  L  R  + + LT  G 
Sbjct: 5   LRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAAGK 64

Query: 64  QFLRQAHLILATVDNAKRSLQQSTDQVAGQLIIGVTSLVAGY-YLADLLTRFQRAYPNVE 122
           QFL  +  IL+ VD+A    ++     AG+L IG TS       ++D L+ F+R YP+V 
Sbjct: 65  QFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPDVH 124

Query: 123 IRVMEDERPYIEHLLVSGEIDVGVLILSNLEDRHALQTEVLTHSPHRLWLPAQHPLLEHD 182
           ++  E         L+ G +D+G  +L N     +L+  V+ H P    +P  HPL  + 
Sbjct: 125 LQTREMNTREQIAPLIEGTLDMG--LLRNTALPESLEHAVIVHEPLMAMIPHDHPLANNP 182

Query: 183 SINLADVAREPLIQLNV---DEMDRNAQRMWSAASLQPRITLRTASTEAVRSLVAAGLGV 239
           ++ LA++A+EP +  +      +  +   +     L P IT        +  LV+AGLGV
Sbjct: 183 NVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGLGV 242

Query: 240 SIQPDMTYRPWSLEGDIIEARPIADLSQTLDVGLAW 275
           SI P    R   ++ + +   PIA+     ++ L W
Sbjct: 243 SILPASFKR---VQLNEMRWVPIAEEDAVSEMWLVW 275