Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  157 bits (398), Expect = 6e-43
 Identities = 123/404 (30%), Positives = 189/404 (46%), Gaps = 20/404 (4%)

Query: 13  AYQYPLLIKRLLMSGARYEKTREIIYRDQLRYSYPTLIERVARLANVLTAAGVKAGDTVA 72
           A   PL     L   A+    R+ +     RYSY  L ER   LA+ L   GV+ G+ VA
Sbjct: 15  ANHVPLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVA 74

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYKAI 132
           ++  +    LE  + +P  GAV+  IN+RL    I + + H   + ++ + EF  +    
Sbjct: 75  ILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVANQA 134

Query: 133 AGHLTTVEKTLLLTDLPEKTADLPNLIGEYEQLLATASPQYDFE--DFDENSVATTFYTT 190
              L      + + D   + ADL + + +YE  LA   P         +  S+A   YT+
Sbjct: 135 LAMLDAPPLLVGIDDDQAERADLAHDL-DYEAFLAQGDPARPLSAPQNEWQSIAIN-YTS 192

Query: 191 GTTGNPKGVYFTHRQLVLHTMGVSTIMGSIDSVRLLGTNDVYMPITPMFHVHAWGLPYVA 250
           GTTG+PKGV   HR   L+    + I         LG   VY+   PMFH + W   +  
Sbjct: 193 GTTGDPKGVVLHHRGAYLNACAGALIF-------QLGPRSVYLWTLPMFHCNGWSHTWAV 245

Query: 251 TMLGLKQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQNTDFGGWKIVIGG 310
           T+ G   V   +  P+ +     +  VT     P ++ M+++A+ A         ++ GG
Sbjct: 246 TLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPV-PVSVITGG 304

Query: 311 SALNRALYEAAKAKGIQLTAAYGMSET-GPLVSCAHLN--DELMAGTEDERTTYRIKAGV 367
           +A   A+  A +A+G  +T AYGM+E+ GP   C      DEL     + R  +  + GV
Sbjct: 305 AAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPL---EARAQFMSRQGV 361

Query: 368 PGPLV-EAAIVDTD-GNFLPADGETQGELVLRAPWLTEGYFNEP 409
             PL+ EA ++DTD G  +PADG T GELV+R   + +GY + P
Sbjct: 362 AHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNP 405