Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  244 bits (623), Expect = 5e-69
 Identities = 147/399 (36%), Positives = 216/399 (54%), Gaps = 15/399 (3%)

Query: 17  PLLIKRLLMSGARYEKTREIIYR----DQLRYSYPTLIERVARLANVLTAAGVKAGDTVA 72
           PLLI  L++   R+  + EI+ R    D  R ++  +  R  ++AN L   G+  GD VA
Sbjct: 9   PLLISSLIVHAERHHASGEIVSRRVEGDIHRSTWGQIASRSRQVANALDGLGLPQGDRVA 68

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYKAI 132
            + W+ +R+LE  F +   G V+HT+N RL PEQ+++ +NHAED+ V  +  F+ L KA+
Sbjct: 69  TLAWNGYRHLELYFGVSGTGRVLHTLNPRLHPEQLVWIVNHAEDKAVCFDMTFLPLVKAV 128

Query: 133 AGHLTTVEKTLLLTDLPEKTAD--LPNLIGEYEQLLATASPQYDFEDFDENSVATTFYTT 190
           A    TV+  + L D  +  AD  +P L   YE  +      Y +  FDENS ++  YT+
Sbjct: 129 AAKCPTVKHWIALCDADKLPADSGIPGL-QSYEAWMGQQPTTYAWPTFDENSASSMCYTS 187

Query: 191 GTTGNPKGVYFTHRQLVLHTMGVSTIMGSIDSVRLLGTNDVYMPITPMFHVHAWGLPYVA 250
           GTTGNPK   ++HR  +LH  G      ++     L   D  +P+ PMFHV+AWGLPY A
Sbjct: 188 GTTGNPKAALYSHRSTLLHAFG-----AALPDAMCLSARDSVLPVVPMFHVNAWGLPYAA 242

Query: 251 TMLGLKQVYPG-RYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQNTDFGGW-KIVI 308
             +G K V+PG   D + + EL   EKVT +  VPT+ QM+L    A N  F    + VI
Sbjct: 243 AAVGCKLVFPGAALDGKSVYELIEAEKVTMAAGVPTVWQMLLGHLQANNLKFSTLNRTVI 302

Query: 309 GGSALNRALYEAAK-AKGIQLTAAYGMSETGPLVSCAHLNDELMAGTEDERTTYRIKAGV 367
           GGSA   A+  A     G+++  A+GM+E  PL +   L +  +A    E+   R+K G 
Sbjct: 303 GGSACPPAMISAFNDVYGVEVLHAWGMTEMSPLGTVCTLKNAQLALPPAEQLKVRLKQGR 362

Query: 368 PGPLVEAAIVDTDGNFLPADGETQGELVLRAPWLTEGYF 406
                +  IV+  G  LP DG+  G+L++R PW+   YF
Sbjct: 363 AIFGADMKIVNEAGEELPWDGKAYGDLLVRGPWIIASYF 401