Pairwise Alignments

Query, 466 a.a., Poly(A) polymerase (EC 2.7.7.19) from Pseudomonas fluorescens FW300-N1B4

Subject, 465 a.a., poly(A) polymerase I (VIMSS) from Escherichia coli BW25113

 Score =  383 bits (983), Expect = e-111
 Identities = 208/437 (47%), Positives = 282/437 (64%), Gaps = 13/437 (2%)

Query: 25  VLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVGGCVRDMLLGITPKDFDVATSATPE 84
           V+   QH++ +   S  A+ ++ RL  AGY+A+LVGG VRD+LLG  PKDFDV T+ATPE
Sbjct: 31  VIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPE 90

Query: 85  QVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRANHPQNDEDEDSNQSSRNESGRILRD 144
           QVR  FRN R++GRRF+L H+ FG EIIEVATFR +H  N  D  ++Q  R ++G +LRD
Sbjct: 91  QVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQ--RGQNGMLLRD 148

Query: 145 NVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDIRNHLIRLIGDPKQRYQEDPVR 204
           N++G++EEDAQRRDFTIN+LYY      + DY  G+ D+++ +IRLIG+P+ RY+EDPVR
Sbjct: 149 NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR 208

Query: 205 MLRAVRFAAKLNFGIEKHSATPIRELAPLLREIPSARLFEEVLKLFLSGYAADTFEMLVD 264
           MLRAVRFAAKL   I   +A PI  LA LL +IP ARLFEE LKL  +GY  +T+++L +
Sbjct: 209 MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE 268

Query: 265 LQLFDPLFPA-SAAALEYNPTYTHTLISEALINTDLRIKQNKPVTPAFLFAALLW-PALP 322
             LF PLFP  +    E   +    +I + L NTD RI  +  V PAFLFAA+ W P L 
Sbjct: 269 YHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLE 328

Query: 323 ARVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKRA 382
                 QE G+    A   A ++++ E C+ +AIPKR T   R+IW +Q R+ RR GKRA
Sbjct: 329 TAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRA 388

Query: 383 DLLLDNPRFRAGYDFLLLRESA--GEQTDGLGEWWTDYQDANDSERRDMIRDLSGKDDGT 440
             LL++P+FRA YD L LR       +   L +WW ++Q +   +++ M+ +L    D  
Sbjct: 389 WKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNEL----DEE 444

Query: 441 GAPRKRRRSGGAKRKRA 457
            +PR+R R     RKRA
Sbjct: 445 PSPRRRTR---RPRKRA 458