Pairwise Alignments

Query, 557 a.a., DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) from Pseudomonas fluorescens FW300-N1B4

Subject, 557 a.a., RNA helicase from Pseudomonas simiae WCS417

 Score = 1051 bits (2719), Expect = 0.0
 Identities = 546/557 (98%), Positives = 551/557 (98%)

Query: 1   MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGHDMIGQAQTGTGKTAAF 60
           MTQETGGFAAFNLNPNILAAV ATGYEEPSAIQQQSIPIIMAG DMIGQAQTGTGKTAAF
Sbjct: 1   MTQETGGFAAFNLNPNILAAVAATGYEEPSAIQQQSIPIIMAGKDMIGQAQTGTGKTAAF 60

Query: 61  ALPILHRIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 120
           ALPILH IDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
Sbjct: 61  ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 120

Query: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKALPAT 180
           AIRNGAQIVVATPGRLCDHLRRDEKVL+TVNHLVLDEADEMLKLGFMDDLEVIFKALP T
Sbjct: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT 180

Query: 181 RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240
           RQTVLFSATLPQSIRAIAERHLRDP+HVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLRDPEHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240

Query: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV 300
           EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVI+SLKDGRLDIVV
Sbjct: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300

Query: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360
           ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360

Query: 361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL 420
           ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL
Sbjct: 361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL 420

Query: 421 AAALLRKATNAQALTLAAIEKERPLVPNNAPRGDRPERTGDRPDRGDRERRAPVPLAEGR 480
           AAALLRKATN QALTLAAIEKERPLVPN+APRGDRPER+GDRPDRGDRERRAPVPLAEGR
Sbjct: 421 AAALLRKATNGQALTLAAIEKERPLVPNSAPRGDRPERSGDRPDRGDRERRAPVPLAEGR 480

Query: 481 ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLTKLK 540
           ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLL KLK
Sbjct: 481 ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLAKLK 540

Query: 541 DTRVAGKQLKLRRYRED 557
           DTRVAGKQLKLRRYRED
Sbjct: 541 DTRVAGKQLKLRRYRED 557