Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N1B4

Subject, 601 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] from Pseudomonas sp. S08-1

 Score =  602 bits (1551), Expect = e-176
 Identities = 308/598 (51%), Positives = 398/598 (66%), Gaps = 7/598 (1%)

Query: 1   MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR 60
           M +YKAPLRD+RFV +E+      +  LP   +    + V AILEE  K   + IAPL+R
Sbjct: 1   MPEYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATP-DMVSAILEEGAKFCEQVIAPLNR 59

Query: 61  AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPTYGGMGMPKAVSAQVEEMVNS 120
             D EGC W++  V TP GF +AYQ + EGGW  +     +GG G+P+++   + EMV  
Sbjct: 60  VGDLEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHHVDHGGQGLPESLGLALSEMVGE 119

Query: 121 ASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180
           A+ S+G+YP L+ GA  +I AH ++E K  YL  + +G W G+MCLTEPH GTDLG++RT
Sbjct: 120 ANWSWGMYPGLSHGAMNTIEAHGTDEQKHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRT 179

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA 240
           KAEPQADGSYKVSGTKIFI+ GEHD+ +NI+H+VLA+LPDAP G KGISLF+VPKF V A
Sbjct: 180 KAEPQADGSYKVSGTKIFISAGEHDMVDNIVHIVLARLPDAPQGTKGISLFIVPKFNVKA 239

Query: 241 DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV 300
           DGS+G RN  +CGSIEHKMGI  +ATCVMNFD A GYL+G  NKGL  MFT MN  RLG 
Sbjct: 240 DGSVGERNAVSCGSIEHKMGIHGNATCVMNFDGATGYLIGPANKGLNCMFTFMNTARLGT 299

Query: 301 GIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG 360
            +QGLA  E ++Q  I+YAR+RLQ RS TG +  DK ADPIIVHPDVRRMLLTMKA  EG
Sbjct: 300 ALQGLAHAEIAFQGGIKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEG 359

Query: 361 GRAFSTYVAMQLDTAKFSEDATTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQVFGGH 420
            RA   + A Q+D  K+S++   +K A+ ++A LTP+AKAF+T++G E   HG Q++GGH
Sbjct: 360 NRAMVYFTAKQVDIVKYSQNEEEKKAADAMLAFLTPIAKAFMTEVGFEAANHGVQIYGGH 419

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYTLFADEIRHFTAT-- 478
           G+I EWG EQ VRD RI+ +YEGT G+QALDL+GRK++ + G     F   +  F     
Sbjct: 420 GFIAEWGMEQNVRDSRISCLYEGTTGVQALDLLGRKVLMTQGEALKGFTKIVHKFCQANE 479

Query: 479 ANADLAEFTQPLNDAVDTLDELTAWLLDRAKNNPNEIGAASVEYLQAFGYMAYAYMWALM 538
            N  +     PL        +LT  +   A  +  E+GAASV+YL   GY   AY WA M
Sbjct: 480 GNEAIKGLVAPLAQLNKEWGDLTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADM 539

Query: 539 AKAAFGKEA----QDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAGQF 592
           A+ A  K A     + FY +KL TARFYF R+LPR  +  A++ +G+ +L  +D   F
Sbjct: 540 ARLAAEKLAAGTEDEAFYKAKLQTARFYFERILPRTRTHVATMLSGASNLMEMDEEHF 597