Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N1B4

Subject, 592 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] from Pseudomonas sp. S08-1

 Score =  995 bits (2572), Expect = 0.0
 Identities = 484/592 (81%), Positives = 535/592 (90%)

Query: 1   MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR 60
           MADYKAPLRDMRFVLNEVFEV+KLWA+LP LAE VD +T  AILEEAGKVT   IAPL+R
Sbjct: 1   MADYKAPLRDMRFVLNEVFEVSKLWAQLPGLAEVVDEDTAAAILEEAGKVTGGVIAPLNR 60

Query: 61  AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPTYGGMGMPKAVSAQVEEMVNS 120
           + DEEGC W +G V TPAGFP+AYQTYAEGGWVGVGG P +GGMGMPK + AQVEEMVNS
Sbjct: 61  SGDEEGCSWTNGVVKTPAGFPEAYQTYAEGGWVGVGGAPEFGGMGMPKVIGAQVEEMVNS 120

Query: 121 ASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180
           A+LSFGLYPMLTAGACLSI  HASEELK  YLPNMY+GVWAGSMCLTEPHAGTDLGIIRT
Sbjct: 121 ANLSFGLYPMLTAGACLSILNHASEELKQQYLPNMYSGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA 240
           KAEPQADGSYK+SGTKIFITGGEHDLTENI+HLVLAKLPDAPAGPKGISLFLVPK MVNA
Sbjct: 181 KAEPQADGSYKISGTKIFITGGEHDLTENIVHLVLAKLPDAPAGPKGISLFLVPKVMVNA 240

Query: 241 DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV 300
           DGSLG +N  +CGSIEHKMGI+ASATCVMNFD A G++V EPNKGL AMFTMMNYERLGV
Sbjct: 241 DGSLGEKNSLSCGSIEHKMGIKASATCVMNFDGATGWIVDEPNKGLNAMFTMMNYERLGV 300

Query: 301 GIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG 360
           GIQGLA GERSYQ+AIEYARDR+QSR+PTG  NKDK ADPIIVHPDVRRMLLTMKA NEG
Sbjct: 301 GIQGLALGERSYQSAIEYARDRIQSRAPTGPVNKDKAADPIIVHPDVRRMLLTMKALNEG 360

Query: 361 GRAFSTYVAMQLDTAKFSEDATTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQVFGGH 420
           GRAFS+YVAMQLDTAK+SED  TRKRAE+LVALLTPVAKAFLTD+GLETT+HGQQ+FGGH
Sbjct: 361 GRAFSSYVAMQLDTAKYSEDKDTRKRAEELVALLTPVAKAFLTDMGLETTIHGQQIFGGH 420

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYTLFADEIRHFTATAN 480
           G++REWGQEQL+RD RITQIYEGTNGIQ+LDL+GRKIVGSGG+FY  F+DE++ F  +A+
Sbjct: 421 GFVREWGQEQLIRDCRITQIYEGTNGIQSLDLMGRKIVGSGGSFYKHFSDEVKAFIGSAD 480

Query: 481 ADLAEFTQPLNDAVDTLDELTAWLLDRAKNNPNEIGAASVEYLQAFGYMAYAYMWALMAK 540
           A L EFT+PL  A+  LDELTAW++++AK NPNEIGAASVEYLQ FGY AYAY+WALMA+
Sbjct: 481 ASLGEFTEPLKAAIANLDELTAWVIEQAKANPNEIGAASVEYLQVFGYTAYAYVWALMAR 540

Query: 541 AAFGKEAQDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAGQF 592
           AA  K+  D+FY SKLGTARF+FARLLPRIHSL+ASVKAGSESL+LLDA QF
Sbjct: 541 AALAKQGDDEFYVSKLGTARFFFARLLPRIHSLTASVKAGSESLYLLDAAQF 592