Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 379 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 73/207 (35%), Positives = 98/207 (47%), Gaps = 24/207 (11%)

Query: 209 LPKTFILPFTLNIMCSQ-VMLMIAAAVAHEAYQMAFRDELTGLPGRRALNERMQRLGRNY 267
           L   F     LN   S  VM+++A     +   +A  D LTG+  RR   + M       
Sbjct: 187 LVTAFFFIIMLNFAISLFVMMLVAERSERKLLVLANTDPLTGVKNRRFFFQTMPAAPDPA 246

Query: 268 VLAMG-DVDHFKKFNDTHGHDVGDQVLRLVASKLS-KISGGGRAYRYGGEEFALVFAGKT 325
             AM  D+DHFK  ND  GH VGD VL+ VA ++S  I GG    RYGGEEF +   G  
Sbjct: 247 DAAMLLDIDHFKSINDRFGHAVGDSVLQEVARRISGSIRGGDVLARYGGEEFIIFLPGAG 306

Query: 326 LEECMPHLEVIRESIATYNIQLRNQDNRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLE 385
           +++     E IR+++A   +                      G   V VT+SIGVA   +
Sbjct: 307 VDKACMIGERIRDAVAINEVD--------------------CGGLRVGVTISIGVATTGD 346

Query: 386 QRTPEEVL-KSADQALYSAKGAGRNCV 411
            R   ++L + AD+ALY AK  GRNCV
Sbjct: 347 MRCDLQMLAEKADRALYRAKTEGRNCV 373