Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  100 bits (249), Expect = 7e-26
 Identities = 69/180 (38%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 237 EAYQMAFRDELTGLPGRRALNERM-----QRLGRNYV-LAMGDVDHFKKFNDTHGHDVGD 290
           E  ++A  D LT L  RRA ++R+       +G  Y  L + D+DHFK+ NDT GH VGD
Sbjct: 171 EYKRIANTDSLTRLSNRRAFDDRLASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGD 230

Query: 291 QVLRLVASKL-SKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRN 349
           ++L  VAS + + +   G   R GGEEFA++  G T EE M   E IR S+ +       
Sbjct: 231 KILATVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSLESTPF---- 286

Query: 350 QDNRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRN 409
                        R + SGA   +VT+SIG A       P E+   AD ALY AK  GRN
Sbjct: 287 -------------RNSRSGADYGTVTISIGFASAARASNPSELYGHADTALYHAKETGRN 333