Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  101 bits (251), Expect = 5e-26
 Identities = 68/183 (37%), Positives = 95/183 (51%), Gaps = 27/183 (14%)

Query: 240 QMAFRDELTGLPGRRALNERMQRL-------GRNYVLAMGDVDHFKKFNDTHGHDVGDQV 292
           ++A  D LTGL  RR L+  ++ L       GR   + M D+D FK  NDT+GHDVGD+V
Sbjct: 289 ELAIVDGLTGLNNRRYLDSHLKILFDRAAVRGRPISICMTDIDRFKLVNDTYGHDVGDEV 348

Query: 293 LRLVASKL-SKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQD 351
           LR  A+++ S + G   A RYGGEEF +V     +E      E +R  +      +R+ D
Sbjct: 349 LREFAARIRSTVRGADLACRYGGEEFVVVMPDTPIELAASVAERLRAIVEDKPFYVRSID 408

Query: 352 NRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQ-RTPEEVLKSADQALYSAKGAGRNC 410
                               +S+T S+G+A        P+E+LK AD+ALY AK AGRN 
Sbjct: 409 R------------------ELSITASLGIATSSGAFGAPDEILKQADKALYEAKHAGRNR 450

Query: 411 VMA 413
           V+A
Sbjct: 451 VVA 453