Pairwise Alignments

Query, 281 a.a., L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 354 a.a., glycine betaine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  208 bits (530), Expect = 1e-58
 Identities = 109/263 (41%), Positives = 166/263 (63%), Gaps = 1/263 (0%)

Query: 7   IPLGQYIAGFVEWLTQNGASTFDAIAVSLETMIHGVTFALTWFNPLALIGLIALLAHFIQ 66
           IPL  ++   ++W+  +    F  + V ++ +++G    L        I + AL+A  I 
Sbjct: 62  IPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQIS 121

Query: 67  RKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVLIGVPLGIVAAHKPMFYTVM 126
              G+ V  + S + I  +G W + M TLA VL A L C++IG+PLGI  A  P    ++
Sbjct: 122 GV-GMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII 180

Query: 127 RPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPDELMDA 186
           RP+LD MQT P FVYL+P + LFG+G VPG++ T++FA+   IRLT LGI  VP +L++A
Sbjct: 181 RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA 240

Query: 187 GKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNT 246
            ++FG S RQ+L +++LP AMP+I AG+ Q +ML+LSMVVIA+++   GLG+ V+  +  
Sbjct: 241 SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR 300

Query: 247 ADIALGFEAGLAIVLLAIMLDRI 269
            D+ L    G+ IV+LAI+LDR+
Sbjct: 301 LDMGLATVGGVGIVILAIILDRL 323