Pairwise Alignments

Query, 389 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N1B4

Subject, 388 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  355 bits (912), Expect = e-103
 Identities = 186/383 (48%), Positives = 267/383 (69%), Gaps = 3/383 (0%)

Query: 5   LLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAVGTAN 64
           L+ALAV AFGIG TEF  MG+LP +A DL VSIP AGLL++ YALGV+ GAP++ + T  
Sbjct: 7   LVALAVGAFGIGVTEFAPMGMLPTIANDLGVSIPTAGLLVSAYALGVLLGAPLMILTTGK 66

Query: 65  MPRKATLLGMTLMFILGNILCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLVAPNK 124
           +PR+  L+G+  +F LGN++ ALA  Y  L+ ARVIT+L HGAFFG+GS+VAA +VAP+K
Sbjct: 67  IPRRHLLVGLMAIFTLGNVMSALATGYYDLLIARVITSLNHGAFFGVGSIVAASVVAPDK 126

Query: 125 RAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPKEIPM 184
           RA A+A MF GLTLA + GVPL T  G+  GWR+ FW +  +G++  +A W  LP  +P+
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWFGELLGWRTAFWGIGGLGLVTMVALWFALP-NLPL 185

Query: 185 DKAN-LASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTIMLLL 243
            K++ + +E KVLG+ +VL AL ++V+ S+++F+VFTYIAPIL + T  S   +T ML+L
Sbjct: 186 PKSDGVLAEIKVLGRGSVLAALALTVVGSSAMFTVFTYIAPILSNETHASTPFITAMLVL 245

Query: 244 FGVGLTAGSMLGGRLADSRLLPSLVGMALAVVVVLAAFSQTSHSVIPAAITLVLWGIFAF 303
           FGVGLT G++ GG+ AD  +  +L+    A+++VL AF+      IPAA+++++WGI +F
Sbjct: 246 FGVGLTLGNIWGGKAADRSIDRTLIVSLSALILVLLAFAFLMRWPIPAAVSILIWGIASF 305

Query: 304 ALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTGALV 363
           A+ P LQ+ +++ A +APNL S +N  AFN GNA GA +GG V+ +G     +   GA +
Sbjct: 306 AVVPPLQMRVMEAAKDAPNLASAVNIGAFNFGNAIGAAVGGAVINAGLGYPAISLAGAAM 365

Query: 364 SGLTVLTALFFIYLQR-RSAVAV 385
           +GL +L  + F +  R R A AV
Sbjct: 366 AGLGLLMVVTFAWGARGRMAAAV 388