Pairwise Alignments

Query, 389 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N1B4

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  342 bits (877), Expect = 1e-98
 Identities = 175/375 (46%), Positives = 249/375 (66%)

Query: 5   LLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAVGTAN 64
           L+ALA+ AFGIG TEF  MG+LP +A DL VSIP AGLL++ YA+GV+ GAP++ + T  
Sbjct: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66

Query: 65  MPRKATLLGMTLMFILGNILCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLVAPNK 124
           +PR+  L+G+  +F LGN++ ALA +YA+L+ ARV+T+L HGAFFGIGS+VAA +V P K
Sbjct: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEK 126

Query: 125 RAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPKEIPM 184
           RA A+A MF GLTLA + GVPL T LG+  GWR+ FW ++ +G++A    W  LP     
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVASP 186

Query: 185 DKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTIMLLLF 244
                 +E +VLG+  VL AL ++V+ S+++F+VFTYIAPILQ     S   VT ML+LF
Sbjct: 187 KGEGAMAEIRVLGRRPVLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAMLVLF 246

Query: 245 GVGLTAGSMLGGRLADSRLLPSLVGMALAVVVVLAAFSQTSHSVIPAAITLVLWGIFAFA 304
           GVGLT G++ GG+ AD  +  +L+     ++ VL  F       +P A+ +++WG  +FA
Sbjct: 247 GVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALAILVWGAASFA 306

Query: 305 LCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTGALVS 364
           L P LQ+ +++ A +APNL S +N  AFNLGNA GA +GG V+ +G     +   GA ++
Sbjct: 307 LVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLAGAAMA 366

Query: 365 GLTVLTALFFIYLQR 379
            L ++  L F +  R
Sbjct: 367 ALGLVLVLLFAWRGR 381