Pairwise Alignments

Query, 389 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N1B4

Subject, 403 a.a., Putative drug efflux protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  306 bits (783), Expect = 9e-88
 Identities = 170/378 (44%), Positives = 239/378 (63%), Gaps = 11/378 (2%)

Query: 1   MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAV 60
           MP ALLAL ++AF IGTTEFVI+GL+P +A DL VS+P AGLL++ YALGV  GAP+L  
Sbjct: 1   MPFALLALTISAFAIGTTEFVIVGLIPTIAADLGVSLPSAGLLVSLYALGVAVGAPVLTA 60

Query: 61  GTANMPRKATLLGMTLMFILGNILCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLV 120
               +PRK  L+ +  +F +GN+L  L+P Y TL+AARV+T L HG FF IGS +A GLV
Sbjct: 61  LAGRLPRKTLLVSLMALFTVGNLLAWLSPGYETLIAARVLTGLAHGVFFSIGSTIATGLV 120

Query: 121 APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPK 180
              K A AIA MF+GLT+A V GVPLGT +GQ+ GWR+TF AV+ +GV+A +   +++P+
Sbjct: 121 PKEKAASAIATMFSGLTVALVTGVPLGTFIGQHFGWRATFLAVAALGVVAIVGSLLFVPR 180

Query: 181 EIP-MDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTI 239
           ++     A+L  +  VL +  +LL   M+ +     F  FTY+AP+LQ +TG     V  
Sbjct: 181 KLAHSPPASLLQQLAVLKQPRLLLVYAMTAVGYGGTFVAFTYLAPLLQQVTGFQASAVGG 240

Query: 240 MLLLFGVGLTAGSMLGGRLADSR-LLPSLVGMALAVVVVLAAFSQTSHSVIPAAITLVLW 298
           ++L +G+ +  G++ GGRLAD +  +P+L  +   + +VL   S T+ +     +T++ W
Sbjct: 241 VMLAYGISVAVGNLWGGRLADRKGPIPALKIIFSLLALVLLVLSFTASNPWLMVLTVLAW 300

Query: 299 GIFAFALCPILQLLIIDQAH----EAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLA 354
           G  AF     LQ+ ++ QA     +A ++ S LN +AFNLG A GAW GG +V  G  L 
Sbjct: 301 GAVAFGNVAGLQVYVVQQAERFAPQAIDVASGLNIAAFNLGIALGAWGGGWIV-DGIGLR 359

Query: 355 DLPWTGALV----SGLTV 368
             PW GALV     GLTV
Sbjct: 360 HTPWIGALVVLGAFGLTV 377