Pairwise Alignments

Query, 389 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N1B4

Subject, 391 a.a., Putative drug efflux protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  305 bits (781), Expect = 1e-87
 Identities = 166/369 (44%), Positives = 240/369 (65%), Gaps = 7/369 (1%)

Query: 1   MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAV 60
           MPLAL AL ++AF IGTTEFVI+GL+P +A+ LA+S+P AG+L++ YALGV  GAP+L  
Sbjct: 1   MPLALFALTISAFAIGTTEFVIVGLVPTIAQQLAISLPSAGMLVSIYALGVAIGAPVLTA 60

Query: 61  GTANMPRKATLLGMTLMFILGNILCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLV 120
            T  +PRK  L+ + ++F  GN+L   AP Y TL+ AR++T L HG FF IGS +A  LV
Sbjct: 61  LTGRLPRKQLLVALMVLFTAGNLLAWQAPGYMTLIVARLLTGLAHGVFFSIGSTIATSLV 120

Query: 121 APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPK 180
              K A AIA+MF GLT+A V GVPLGT +GQ+ GWR TF AVS++GVIA ++  + +P 
Sbjct: 121 PKEKAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSLLGVIALMSSQLLIPA 180

Query: 181 EIP-MDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTI 239
            IP    A++  + KVL    +LL   ++ L    +F+ FT++AP++QD+ G SP  V+ 
Sbjct: 181 NIPGRAAASIRDQVKVLTHPRLLLIYAVTALGYGGVFTAFTFLAPMMQDLAGFSPAAVSW 240

Query: 240 MLLLFGVGLTAGSMLGGRLADSR-LLPSLVGMALAVVVVLAAFSQTSHSVIPAAITLVLW 298
           +LL +GV +  G++ GG+LAD    +P+L  +  A+ V+L  F  T+ +   A  T+++ 
Sbjct: 241 ILLGYGVSVAIGNIWGGKLADKHGAVPALKFIFAALFVLLMVFQVTASTQYAALATILVM 300

Query: 299 GIFAFALCPILQLLIIDQAHE----APNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLA 354
           G+FAF   P LQ+ ++ +A +    A ++ S LN +AFN+G A G+ IGG  V     LA
Sbjct: 301 GVFAFGNVPGLQVYVVQKAEQFTPNAVDVASGLNIAAFNIGIALGSVIGGQTV-EHYGLA 359

Query: 355 DLPWTGALV 363
             PW GAL+
Sbjct: 360 QTPWIGALI 368