Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 204 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  117 bits (293), Expect = 1e-31
 Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 11/185 (5%)

Query: 19  NQLRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAPYVAGAKVLDPFAGSGALFLE 78
           +++RIIGG+W   KL   D PGLRPTP RVRETLFNWL   ++G + +D FAG+GAL LE
Sbjct: 17  HEVRIIGGQWKRTKLPVADRPGLRPTPSRVRETLFNWLGQDLSGWRCIDAFAGTGALGLE 76

Query: 79  ALSRGAAMGQALDASNIAVASIKEHLGTLRCTTGQVQTADALRYLETQPATAFDLVFLDP 138
           A SRGA     ++  +  +A++      L+ T  +V+  D +  L  +     D VFLDP
Sbjct: 77  AASRGAVEVVLVEQDSALLANLGRITTQLKATGVRVERGDGVAALRQRAGQGLDAVFLDP 136

Query: 139 PF--NQNLLPAVCTLLEERHWLSDDAWVYTE-----SETAPSILGLPENWRLHREQKSGR 191
           PF   QN       L   R  +  D  +Y E     SE   + +GL    ++HR+ K+G 
Sbjct: 137 PFGDGQNEALYAAALAAARQAVRGDGLIYLEAPRVWSEDELAQIGL----QVHRQGKAGA 192

Query: 192 VYYAL 196
           V + L
Sbjct: 193 VAFHL 197