Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 198 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  185 bits (469), Expect = 6e-52
 Identities = 97/194 (50%), Positives = 125/194 (64%), Gaps = 4/194 (2%)

Query: 8   KKPVHNVHNGVNQLRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAPYVAGAKVLD 67
           KKP H+   G  Q+RIIGG+W  RKL  PD+PGLRPT DRVRETLFNWLAP +  A  LD
Sbjct: 2   KKPTHS---GSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVMVDAHCLD 58

Query: 68  PFAGSGALFLEALSRGAAMGQALDASNIAVASIKEHLGTLRCTTGQVQTADALRYLETQP 127
            FAGSGAL LEALSR AA    L+        ++++L TL+    +V   + L +L +QP
Sbjct: 59  CFAGSGALGLEALSRYAAQATLLEMDRAVSQQLQKNLATLKANNARVVNTNTLTFL-SQP 117

Query: 128 ATAFDLVFLDPPFNQNLLPAVCTLLEERHWLSDDAWVYTESETAPSILGLPENWRLHREQ 187
            T   +VF+DPPF + LL     LLE + WL+DDA +Y ESE    +  +P NW L+RE+
Sbjct: 118 GTPHHVVFVDPPFRKGLLEETLQLLETQGWLADDALIYVESEVENGLPPVPANWALYREK 177

Query: 188 KSGRVYYALWQRMA 201
            +G+V Y L+QR A
Sbjct: 178 VAGQVAYRLYQRDA 191