Pairwise Alignments

Query, 287 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 286 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  151 bits (381), Expect = 2e-41
 Identities = 94/280 (33%), Positives = 152/280 (54%), Gaps = 3/280 (1%)

Query: 5   ELKAFYMVARLGSITLAAKKLGLSQPTVTTQIRHLESQYSVELFYRGGRRLSVSDEGARL 64
           +L+AF  VAR GS T AA +L +SQP VT  I+ LE  Y + L  R  RR+ +++EGARL
Sbjct: 5   QLRAFDAVAREGSFTRAAARLFISQPAVTGHIKALEEYYQIPLLRRTARRVELTEEGARL 64

Query: 65  LPMVKALLQQEADIEFFLRNSGQ-VQGTLRIAATAPYYILDLVKTFRERLPQVEVSVEIG 123
             + +A+     + +  L  + Q + G L +AA  P+ ++ ++ + R R P + V++ +G
Sbjct: 65  ASITRAIFGLVDEAQTMLEANRQLLTGRLEVAADGPHLVMPMIASLRARYPGITVNLRLG 124

Query: 124 NSQQVLEALEDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLAVHD-HVPLSAL 182
           N+Q+ L AL     DVA  +++     L  + L    +   V   HP A+    + L+ L
Sbjct: 125 NAQETLAALMSEHADVAVLTEVAPRNGLHLQPLSESRICALVPAAHPWAMQSGGIRLAQL 184

Query: 183 AGHTLLMRESGSTTRRLTEELLAGAGVSFGPLLEIGSRESIREAVLRNIGISIIARQEVP 242
               +++RE  S TRR  +E  A  GV    LLE+ SRE++ EAV   +G+ +++  EV 
Sbjct: 185 NEVIMVLREPSSITRRTFDEACAATGVKPKVLLELDSREAVTEAVAAELGVGVVSSMEVS 244

Query: 243 HDPQLRVLTLENAPQIPEY-LYCLKERKGARLPAAFLGLA 281
            DP++R + L     +  + L C++ R+  RL  AF  LA
Sbjct: 245 QDPRVRAVPLLGDGLVNRHVLGCMERRRSLRLIQAFFELA 284