Pairwise Alignments

Query, 287 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 289 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  112 bits (279), Expect = 1e-29
 Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 29/297 (9%)

Query: 5   ELKAFYMVARLGSITLAAKKLGLSQPTVTTQIRHLESQYSVELFYRGGRRLSVSDEGARL 64
           +L+ F +VA L   T AA +LG+SQ  V+  I+ LE +  V LF R   ++ +SD GA+L
Sbjct: 5   QLEIFSLVAELQGFTSAAHRLGISQSAVSHAIKGLEQELGVALFRRHQAQVELSDIGAQL 64

Query: 65  LPMVKAL------LQQEADIEFFLRNSGQVQGTLRIAATAP----YYILDLVKTFRERLP 114
           L   +A+      LQQEA         G  +GTLRI +  P    Y +  ++  FR   P
Sbjct: 65  LGRARAMLGLANTLQQEA-----ADARGMKRGTLRIGSFGPTSSTYLLPKILNRFRVAYP 119

Query: 115 QVEVSVEIGNSQQVLEALEDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLAVH 174
            +EV V+ G  +QV++ L++ RVD+     +LD  R     L  D +V  +   H LA  
Sbjct: 120 GIEVHVDEGPDRQVIQWLDERRVDI--GFVVLDQERFDTFPLFEDQMVALLPAGHTLAGR 177

Query: 175 DHVPLSALAGHTLLMRESGSTTRRLTEELLAGAGVSFGPLLEIGSRESIREAVLRNIGIS 234
           +HV L  L      + E+GST   L   L   A ++           S  E V R   +S
Sbjct: 178 EHVSLKDLCNDPFALTEAGST--ELVVRLFNEARLTPNVRYRCSQLLSTLETVSRGDAVS 235

Query: 235 IIARQEVP--HDPQL--RVLTLENAPQIPEY--LYCLKERKGARLPAAFLGLAQEMA 285
           ++A+  +P  HDP+   RVL    +P++P    L  L  R+ +    AF+ +AQ +A
Sbjct: 236 VVAQASLPAGHDPRYVQRVL----SPRVPRQVGLAVLDRRQSSPATLAFIRIAQGLA 288