Pairwise Alignments

Query, 287 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 287 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 8e-42
 Identities = 96/280 (34%), Positives = 155/280 (55%), Gaps = 3/280 (1%)

Query: 5   ELKAFYMVARLGSITLAAKKLGLSQPTVTTQIRHLESQYSVELFYRGGRRLSVSDEGARL 64
           +L+AF  VAR GS T AA++L +SQP VT  ++ LE  Y + L  R  RR+ +++EG RL
Sbjct: 5   QLRAFDAVAREGSFTRAAERLFISQPAVTGHVKALEEHYQITLLRRTARRVELTEEGTRL 64

Query: 65  LPMVKALLQQEADIEFFLRNSGQ-VQGTLRIAATAPYYILDLVKTFRERLPQVEVSVEIG 123
             + +A+     + +  L  + Q + G L +AA  P+ ++ ++   RER P V V++ +G
Sbjct: 65  AAITRAMFGLAEEAQAMLEANRQLLTGRLEVAADGPHRVMPMLALLRERYPGVTVNLRLG 124

Query: 124 NSQQVLEALEDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLA-VHDHVPLSAL 182
           N+Q+ L AL     DVA  +++     L  + L    L   +   H  A   + +PL+AL
Sbjct: 125 NAQETLAALLGEHADVAVLTEIEPRKGLHLQNLCESRLCALLPVGHAWASAREDLPLAAL 184

Query: 183 AGHTLLMRESGSTTRRLTEELLAGAGVSFGPLLEIGSRESIREAVLRNIGISIIARQEVP 242
               +++RE  STTRR  ++    AGV    LLE+ SRE++ EAV   +GI +++  EV 
Sbjct: 185 HQQIMVLREPSSTTRRTFDKACIKAGVQPRVLLELDSREAVTEAVASQLGIGVVSSTEVA 244

Query: 243 HDPQLRVLTLENAPQIPEYLY-CLKERKGARLPAAFLGLA 281
           +DP++    L     + +++  CL+ R+  RL  AFL LA
Sbjct: 245 NDPRVVARPLAGEGLVNQHVIGCLERRRELRLIQAFLSLA 284