Pairwise Alignments

Query, 1457 a.a., Rhs-family protein from Pseudomonas fluorescens FW300-N1B4

Subject, 1530 a.a., putative RHS family protein from Pseudomonas putida KT2440

 Score = 1058 bits (2736), Expect = 0.0
 Identities = 618/1440 (42%), Positives = 820/1440 (56%), Gaps = 138/1440 (9%)

Query: 1    MSDALWAARLGDALDHASMMADILGGVLEVAANIAITALATAAVVAATGITVVTGGLGCF 60
            M+  + AAR+GDA+ H S+ A+++  V E     A TA   AA+  A   TV TGG    
Sbjct: 1    MAQTVHAARMGDAILHPSLAAEMISAVAEAVIYAAATAAVAAAISLAVVGTVATGGAAGV 60

Query: 61   VLGLVVGTIVGLAMS-KTGADK----GLSNLCESFSNALFPPTVQANILTGSTNTLTNNI 115
             +  V G  VG   +   G D+     +S+ C+S  N++  P     I +GSTN L N+ 
Sbjct: 61   AIAAVAGVAVGAVSTLSVGEDQTVGDAISSFCDSLGNSVDSPDPYGKIESGSTNVLINSE 120

Query: 116  PAARAAGAI-PSHVAPAGTELEAPEPEAEPSYLDMAESFF-----------SQMWRPTVA 163
            PAARAAG   P     A TE E P        + MA   +             ++ P V 
Sbjct: 121  PAARAAGITGPPGGGAADTEQEEPSILENVGSMAMAAVPYLVPFVGLGMAIRDIFNPPVT 180

Query: 164  TPA-PGAVPKPLDLLVCMKHPPMPPQFMAEGSDKVTINGQPAVRSGDRSTCDAKVVSSGL 222
            TPA PG+ P   D + C +HPP+P  F+A+GSDKV INGQPA RSGD++TCDA +  +  
Sbjct: 181  TPANPGSEPAEGDKISCSRHPPLPDTFIAQGSDKVFINGQPAARSGDKTTCDATIDVNEN 240

Query: 223  ISSNVTIGGGSVVVREIRSGKTPGVGLAVTALLMLKGGKGKFFSKLPCMLIGGATSMAVS 282
            +S NV IGGG+  VR+IR+GK                      SK+  M  G    M +S
Sbjct: 241  VSPNVRIGGGTATVRDIRNGK----------------------SKI-AMFTGIIAGMLIS 277

Query: 283  SAMGAMANAAMGSSNPVHAATGAKVLGGDEELDFVLPGILPMDWQRFYNSRDERRDGLFG 342
               G +    +G  NPV  ATG+K+  G E++DF LPG+L + W R Y+SRD R DGL G
Sbjct: 278  RRFGRIKGCTLG--NPVAVATGSKLQEGPEDIDFNLPGLLAIQWARRYDSRDMRSDGLLG 335

Query: 343  AGWSVSYEVCVEILPHSEGGETLVYTDEQGRRIDMGSIPLGGAVFSAGEGLSVRRHVNGQ 402
             GWSV YEV +  +PH +GG   +Y D  G R+++G +  G A  SA +GL+  +  +GQ
Sbjct: 336  MGWSVPYEVELARVPHPQGGTLWIYIDNDGNRLELGRLSAGDAFISAVDGLAFFQLEDGQ 395

Query: 403  LLIES-DDGVYRLFNPTPGNTVLLRLDQLGDRNDNRIYLDYDDVGQLVRLRDTFDLVQVE 461
             ++E  ++G+YR+F+  P N    RL +LGDRN N + L YD+ G+L  L D +    V+
Sbjct: 396  TVVEDINEGLYRVFDTDPLNPKRSRLIRLGDRNLNCLDLLYDEQGRLKALYDKYGQTVVQ 455

Query: 462  L---IRERDRVARVERLYPD-------QRREILASYAYDTRGNLAEVRDATGQVQRCFSY 511
            L    R   RV+ V R++         +R E+L SY Y   G L EV DAT Q  R F+Y
Sbjct: 456  LHYAARHPQRVSEVSRVFLKNGGTPTVERSELLVSYRYTDNGQLHEVLDATDQRVRRFTY 515

Query: 512  DAGQRMVEHQLPTGLRCFYEWA-----------------------LIE---DLEWRVVRH 545
                 +  HQL +G    YEWA                       L+E   D EWRV+RH
Sbjct: 516  TPEGYLNSHQLASGAVREYEWARFAIPETRPTPKRLDGTPYRLPPLLEPQPDHEWRVIRH 575

Query: 546  WTDEGDAYQFDYDLVAGVTRITDGLQRVSTRRWNAQHQITEYTDNLGQTWQFEWNDERQL 605
            W  +G+ Y+F+Y+L AG T +TD L R     W   +++ ++ D  G  W  E     QL
Sbjct: 576  WGSDGEEYRFEYNLEAGETLVTDNLGRRDHYYWGPLYEVYKHIDPQGNCWLAEVI-AGQL 634

Query: 606  LSATDPQGGRYEYSYDDAGNLIGETDPLGRSDSTLWLELWALPLVETDAAGNSWQYRYDQ 665
            +   DPQGG + YSYDD G LI   DPLGRS+   +L  WALP+  TD AG + QY YD 
Sbjct: 635  IKRIDPQGGEWRYSYDDIGRLIETRDPLGRSEHIKYLRHWALPIQVTDTAGRTRQYGYDS 694

Query: 666  RGNCIAETDPLGHITRYRYDTHGQVVEIIDATGKSKKLRWSPFGQLVEHIDCSGYPTRFN 725
             GN + + DPLG  T+Y+YD  G+V ++ DA  KSK L W+  GQL+ + DCS   T ++
Sbjct: 695  HGNLLWQQDPLGRETQYQYDPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYH 754

Query: 726  YDHRGYLQTITDALGERTQFSYDAQGRLLSSQLPDGRTEQYQRDVSGQLTGYTDPAGHTT 785
            YD  G L+   +A GE T F YDA+G L+ S+ PDGR ++Y+ DV+GQLT Y DPA  T 
Sbjct: 755  YDAHGRLRESINARGEHTHFRYDARGYLVESERPDGRIDRYEIDVAGQLTRYIDPAQKTL 814

Query: 786  LYQHNRRGQVRQRTDAHGRQVQFGYDSYGRLQALTNENGESYRFAWDAGDRLTEQQDLDG 845
             ++++  G++ +RTDA G  V+F YD+YGRL  LTNEN ESYRF WD  DRL  Q+DLDG
Sbjct: 815  QFRYDPSGRLVERTDAMGYSVKFRYDAYGRLLQLTNENDESYRFGWDELDRLVAQKDLDG 874

Query: 846  SAKRYTYDLLDNVAAVTVVPA------LYGNGLAVVPETPLAPIVHRLERDAAGRLIAKV 899
            S + Y Y++LD V  +T VP+      L  N     P T    I H  ERDA GRL++K 
Sbjct: 875  SGRLYAYNVLDEVIRLTHVPSPDEQPPLSDN----APPTRTTAIRHDFERDAIGRLVSKR 930

Query: 900  TDDGRTDYTYDPLDQLTAVTFTDHQGNAQTLSFAYDALGQLLEEQSAAGSLHHHYDELGN 959
            T+DG TDY YD  D L ++TFTD++G  Q L + YDA GQLL E ++AG L + YDELGN
Sbjct: 931  TEDGTTDYRYDAADNLLSITFTDNKGEKQQLDYTYDANGQLLSETNSAGLLQYRYDELGN 990

Query: 960  LIQTQLPDGRWINRLHYGSGHLHQINLDGQVISDFERDRLHREVLRTQGQISTRSEYDRS 1019
            L    LPD R +N L+YGSGHLHQINL+G+VISDFERD +H EVLRTQG++ TR+ YD S
Sbjct: 991  LQTLVLPDQRELNHLYYGSGHLHQINLNGRVISDFERDAVHDEVLRTQGKLVTRTRYDTS 1050

Query: 1020 GRLRARQRRHSSQPSLMPAAVQKHFEYDPADNLIGKLDQQPATQHR-------------- 1065
            GRL  +   +   P+ +   + K + YD +DNLI ++  Q  TQ R              
Sbjct: 1051 GRLAGKAIHYRDAPAEVLPLLDKAYRYDASDNLIAEVLTQ--TQRRGMSNAANDENANLE 1108

Query: 1066 ----QLLHYDATGRIIASQD-----------SLHGQR--------ETFAYDAAANLLDGP 1102
                + L    TG+  +  +           ++H  R        E F YD A NL DGP
Sbjct: 1109 QIIGRFLDLPHTGKTYSGHNRYGYDLNEQLQTVHQSRPNWQATQVEDFKYDKAGNLFDGP 1168

Query: 1103 QPGAGLVVHNKLLTYQDKRYRYDAFGRMIEKRSAKRGLQRFGYDAESRLI---EVRNDNG 1159
            +   GL+ HN++L YQDKRYRYD FGR+ EKR     +Q F YDAE RL+   + R+   
Sbjct: 1169 KLN-GLIKHNRVLVYQDKRYRYDRFGRLCEKRIGSNWVQYFEYDAEQRLVCVEQYRSGER 1227

Query: 1160 SVVRMTYDPLGRRIEKTGHDSNGYPLGETR--FTWDGLRLLQEHRHQQTSLYLYED-EGY 1216
              V   YDPLGRRI K  +  + YP    R  F W G RLLQE +    SLY+Y   E Y
Sbjct: 1228 ERVVFAYDPLGRRISKEVYQRD-YPEPRRRVLFHWQGFRLLQEVQSGLASLYVYATVESY 1286

Query: 1217 EPLARVDGTGPLQKIRYYHNDLNGLPEQLTEADGHNVWQATYRVWGNTLEEVREPYYIEE 1276
            +PLARVDG    + I Y+H  L G PEQLT++DG+ +W++ +  WG  + E        E
Sbjct: 1287 DPLARVDGKPGSEAIHYFHTTLVGQPEQLTDSDGNTIWRSDHHGWGKIINEWHSQQNGRE 1346

Query: 1277 QNLRFQGQYLDRETGLHFNTFRFYDPDVGRFTTPDPIGLDGELNLYQYAPNPIAWVDPWG 1336
            QNLR QGQY+DRETGLHFN FRFYDPD+GRFTT DP+G++G +NLY YAPN + + DP G
Sbjct: 1347 QNLRNQGQYIDRETGLHFNIFRFYDPDIGRFTTTDPLGIEGGVNLYSYAPNIVNYSDPLG 1406