Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator PA5437 from Pseudomonas fluorescens FW300-N1B4

Subject, 293 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score =  116 bits (291), Expect = 6e-31
 Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 4/287 (1%)

Query: 1   MTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTEA 60
           +TLRQL++F EV    S ++A+  ++L+Q AVS  +  LE  +G  LFD VGK+L + E 
Sbjct: 3   ITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEH 62

Query: 61  AEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAVESSAKYFVPHLFAAFKRQHPEVN 120
              L   +  +  +   ++    +  G+++     A  +   Y +P + A ++  +P++ 
Sbjct: 63  GRLLYPRALALLEQAVEIEQLFREDNGAIR---IYASSTIGNYILPAVIARYRHDYPQLP 119

Query: 121 LHLTVVNRGQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPPDHPLCHMGPL 180
           + L+V N   V++ + D R D+  +        +   P+L + +V  A P  PL   GP+
Sbjct: 120 IELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPV 178

Query: 181 RLQDLEPYTLLLREHGSGTRLACEEYFKEKRVHFTQTQEVASAEAQRECVLAGLGVALLT 240
            L+ L     +LRE GSGTR   +         F    E+ ++EA +  V  GLG++ L+
Sbjct: 179 TLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLS 238

Query: 241 RHALNLELATGGLIELPVEELPLYRSWCLVQAKAKRLSPVAHAFLAF 287
           R  +  +L  G L E+ V    L R+   +  + K LS     FL +
Sbjct: 239 RRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDY 285