Pairwise Alignments

Query, 367 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N1B4

Subject, 361 a.a., DNA replication/repair protein RecF from Erwinia amylovora T8

 Score =  270 bits (689), Expect = 6e-77
 Identities = 141/359 (39%), Positives = 224/359 (62%), Gaps = 4/359 (1%)

Query: 1   MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAIHLLGLARSFRSSRLLPV 60
           M+L+R+ +   RN+     + +P  N L G NGSGKTSVLEAI+ LG  R+FRS +   V
Sbjct: 1   MALTRLLIKDFRNIEDADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGRV 60

Query: 61  IQYEQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           I++++ A  + G++   E   S +G++++R G+ ++RIDG +    A+LA++LP+QLI P
Sbjct: 61  IRHDRDAFVLHGRIAATEREIS-VGLTKNRAGDSKVRIDGSDGHKVAELAQMLPMQLITP 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHGTLDAVSQAVWD 180
           + F LL G PK RR ++DWG FH EP F + W  L++ L+QRN+ LR  +     +A WD
Sbjct: 120 EGFTLLNGGPKYRRAYIDWGCFHNEPGFFNAWSNLRRLLKQRNAALRQVSRYQQIRA-WD 178

Query: 181 RELCQASAEIDEYRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKDRELSAVLAGSL 240
           +EL   + +I ++R AY +A+      T ++ +    L+ S+ RGWDKD   + +L  + 
Sbjct: 179 QELAPLAEQISQWRAAYSEAIAADINATCAQFLPEFQLSFSFQRGWDKDSGYAELLERNF 238

Query: 241 QRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI 300
           +RD+ + +T +GP +AD R+R       D+LSRGQ KL++CALR+AQG  +++    +C+
Sbjct: 239 ERDRALTYTASGPHKADFRIRAEGTPVEDLLSRGQLKLLMCALRLAQGEFLTRQNGRRCL 298

Query: 301 YLVDDLPSELDEHHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRI 359
           YL+DD  SELDE  R+ L   L+  + QVF++ +  E + +    +    +FHVEQG+I
Sbjct: 299 YLIDDFASELDETRRQLLAAHLKATQAQVFVSAIAAEHVFD--MADEKGKMFHVEQGKI 355