Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 368 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  242 bits (617), Expect = 1e-68
 Identities = 157/351 (44%), Positives = 202/351 (57%), Gaps = 14/351 (3%)

Query: 13  ELEARLRLHRLPELGPARFKKLLEAFGSASKAISAPASAWRAL-GLPLACAEARRSSEIR 71
           EL A LRL   P +G    +KLL AFG      + PA AW+A+ G   A A  +   ++ 
Sbjct: 5   ELAAWLRLLLTPGVGLDSARKLLAAFGLPEAVFAQPAPAWQAVVGARAADALQQPPEDLE 64

Query: 72  DRASHALAWL-ERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQ-LAMVGS 129
            +     AWL E P +HLL    P YP  L Q++D P LL+  G    L  P+ LA+VGS
Sbjct: 65  AQVDRTEAWLAEGPDRHLLTLGDPLYPPDLLQMADPPVLLYVLGQVQALHHPRRLAIVGS 124

Query: 130 RRASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFY 189
           R  +  G   A  F++ L  A   + SGLALGID AAH  AL  G  TV V+GTGL+  Y
Sbjct: 125 RNPTPQGETNARQFAQALGQAEVCVVSGLALGIDGAAHDGALLGGAPTVAVVGTGLDRVY 184

Query: 190 PQRNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLI 249
           P+R+  LA  +   G A++SE+PL   P P++FP+RNRII+GLS G LVVEA+V SGSLI
Sbjct: 185 PKRHLALAHRIAMQG-AIVSEYPLGTPPLPAHFPQRNRIIAGLSQGTLVVEAAVQSGSLI 243

Query: 250 TARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQRLPLS--- 306
           TAR+A EQGREV+AIPGSIH P ++GCH LIR GA LVE+ + ILE L      P S   
Sbjct: 244 TARMAVEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQDILEDLHFVP--PASPRD 301

Query: 307 -----TETPTETHPLLILLHAAPHTSEALAVTSGWALSKVLAALTELEMDG 352
                T        LL  +   P + +AL   +G   + + A L ELE+ G
Sbjct: 302 DGEPGTRDSANEDSLLKAMGHDPVSLDALQARTGLDTAHLQAHLLELELSG 352