Pairwise Alignments

Query, 448 a.a., alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas fluorescens FW300-N1B4

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  308 bits (790), Expect = 2e-88
 Identities = 186/439 (42%), Positives = 263/439 (59%), Gaps = 15/439 (3%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATATSAAQAEALLQRQVFDLCFLDLRLGEDNGLDV 70
           IL+VDD+ +     +  L   GY+VA A S  QA   ++ QVFDL   D+R+ E +G+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           L +++   P + V+I+TA+S+V+TAV+A++ GA DYL+KP   D L+    K L      
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL------ 121

Query: 131 ARLEALEGE---VRKPKEGLDSHSPAMKVVLETARQVASTDANILILGESGTGKGELSRA 187
           A   +++ E   V   + G+   SPAM+ +L     VA ++A +LI G+SGTGK  ++RA
Sbjct: 122 AHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARA 181

Query: 188 IHGWSKRQKKSCVTINCPSLTAELMDSELFGHSRGAFTGASESTLGRVNQADGGTLFLDE 247
           IH  S R +K  VT+NC +L   L++SELFGH +GAFTGA +   GR  +ADGGTLFLDE
Sbjct: 182 IHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDE 241

Query: 248 IGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYR 307
           IGD    +Q +LLR IQ++E +RVG       DVR++AAT+ +L   V  GRFR+DL YR
Sbjct: 242 IGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYR 301

Query: 308 LNVITLHLPPLRERREDILNLADRFLARFVKEYSRPARCFSDEAREALLSYRWPGNIREL 367
           LNV+ + +P LR+RREDI  LA  FL RF +   +  + F+ +A + L+ Y WPGNIREL
Sbjct: 302 LNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIREL 361

Query: 368 RNVVERASIICPQERVELSHLGMAETPTNHTPRIGAALSLD---ELEKAHIGAVL-ATAD 423
            N VERA ++   E +    L +A   T     +G +  +    E+EK  I A L  T  
Sbjct: 362 ENAVERAVVLLTGEYISERELPLAIAST--PIPLGQSQDIQPLVEVEKEVILAALEKTGG 419

Query: 424 TLDQAAKTLGIDASTLYRK 442
              +AA+ LGI   TL  K
Sbjct: 420 NKTEAARQLGITRKTLLAK 438