Pairwise Alignments

Query, 676 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 667 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  901 bits (2329), Expect = 0.0
 Identities = 488/683 (71%), Positives = 542/683 (79%), Gaps = 23/683 (3%)

Query: 1   MSDEAQRWKEKYLKSIEQQEKLERRWDARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMRE 60
           MSD+A+RW+EKYL+SIEQQEKLERRW+ARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMRE
Sbjct: 1   MSDDAERWREKYLRSIEQQEKLERRWNARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMRE 60

Query: 61  VVRTDDMDAGLAALLPRLEKAVLDSEQRRETRVNQVSAALTALVSQLQALPLPREVSRPL 120
           VVRTD+MDA LAALLPRLEKAVL+SEQRRETR+ Q+S ALTALV+QLQ+LPLP+EVSRPL
Sbjct: 61  VVRTDEMDAALAALLPRLEKAVLESEQRRETRIEQMSTALTALVAQLQSLPLPKEVSRPL 120

Query: 121 KHFAKQLDGRVSQAREIPLLLSELSGLQGKALNLLENPAEPDRPGFLQRLFSRETEETAP 180
           K F+K L+ RV QAREIPLLLSELSGLQGKAL++LE PAE  RPG LQRLF    +E AP
Sbjct: 121 KKFSKHLEARVGQAREIPLLLSELSGLQGKALSVLETPAEAHRPGLLQRLFGGHGQEDAP 180

Query: 181 QLAVPESQMPAPQPVEPVA-ASPAEPPQATVNLAPAADKPQGVLPTVEAAMPAA-APPEP 238
               P++  PA    EP + A+PA      V   P     Q V P  E   PAA  PP P
Sbjct: 181 ----PQAHEPATSAAEPASEAAPATLVSPPVEPVPVPLAAQPVRPVDETVEPAAFIPPMP 236

Query: 239 AQIEAPIAMA--PAAEVVAFEPPILE---PEATSSQVTELPTRPDIEQPQEPVPAIALPA 293
                P+A    P  E VA  P   +   P   SS   EL     +E  Q+P  A     
Sbjct: 237 ESTPVPVADVSHPMTEPVAPAPVQTQDPVPAPASSNPDELVCEVPLEAGQQPSAA----- 291

Query: 294 TLLSAINPDELTPVAIDPEPSGHDILYALPDSPEPSYSSVAKHIEDTLLGLLDDLALPER 353
               A  P+ +  + +DPE S     YALPDSPEPSYSSVAKHIEDTLLGLL DL LPER
Sbjct: 292 ---GADEPEIVESLPVDPEDSH----YALPDSPEPSYSSVAKHIEDTLLGLLGDLTLPER 344

Query: 354 HRPQAEAMRDRLQNGLNWYELLPILDDLATLMLAITDSGQHEFEAYLKQLNERLESFQSN 413
           HRPQAEAM +RL+NGLNWYELLPILDD ATLMLAITDSGQHEFEAYL++LN+RLESFQS+
Sbjct: 345 HRPQAEAMGERLRNGLNWYELLPILDDFATLMLAITDSGQHEFEAYLQRLNDRLESFQSS 404

Query: 414 LQAASEGHADNRSAARDMDTQIREQVDGLQSSMQEAADLDDLKHVLENHLEGLLGTMDQH 473
           L+AASEGHADN  A+R+MDTQIREQVDGLQSSMQEA DL+ LK VLENHLEGLLGTMDQH
Sbjct: 405 LRAASEGHADNLCASREMDTQIREQVDGLQSSMQEADDLEGLKQVLENHLEGLLGTMDQH 464

Query: 474 QKQRDEREQEVAARLQSLAERVAHMEQEALGYREHLEEQRQKALIDPLTGLPNRAAWSER 533
           + QRD+REQEV+ RL+SLAERVA MEQEA   RE+LEEQRQKALIDPLTGLPNRAAWSER
Sbjct: 465 RMQRDQREQEVSERLKSLAERVAIMEQEAQVVRENLEEQRQKALIDPLTGLPNRAAWSER 524

Query: 534 LEHEIGQWQQHGTTLLLAMLDLDHFKRINDNYGHLAGDKVLKIIANVLRKRLRGTDFIAR 593
           LEHE+ +WQ+ G +LLLAMLDLDHFKRINDNYGHLAGD+VLKIIA VLRKRLRG+DFIAR
Sbjct: 525 LEHEVAKWQRQGNSLLLAMLDLDHFKRINDNYGHLAGDRVLKIIATVLRKRLRGSDFIAR 584

Query: 594 FGGEEFVLLMPATLPMVGAKLLETLRASIEACPFHFKGERVTITISMGLTAFRPGEHSDL 653
           FGGEEFVL++P T    GAKL E LRA+IEACPFHFKGE VTIT+SMGLTAFR GE SD 
Sbjct: 585 FGGEEFVLMVPDTPLAAGAKLAEKLRAAIEACPFHFKGEPVTITVSMGLTAFRAGESSDQ 644

Query: 654 VLKRADQALYRAKNNGRNRVETG 676
           VLKRADQALYRAK  GRNRVE G
Sbjct: 645 VLKRADQALYRAKTAGRNRVELG 667