Pairwise Alignments

Query, 265 a.a., Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase from Pseudomonas fluorescens FW300-N1B4

Subject, 257 a.a., polysaccharide deacetylase from Pseudomonas simiae WCS417

 Score =  420 bits (1079), Expect = e-122
 Identities = 215/260 (82%), Positives = 229/260 (88%), Gaps = 3/260 (1%)

Query: 1   MRLRLLLGLLCCLAGVAHAAPATTAATPAKAYLSLIIDDLGQNLLQDRRVLALPGPVTAA 60
           MR  L++ +LC LAGVAHA PA     P KAYL+LIIDDLGQNL +DRRVLALPGPVT A
Sbjct: 1   MRFALIIAVLCSLAGVAHATPA---GEPHKAYLTLIIDDLGQNLPRDRRVLALPGPVTTA 57

Query: 61  IMPDPPHATEFAREAHRAGKIVILHMPMAPATGPFAWHPELPIEELEKRLNAAFKAVPYT 120
           IMPD PHA EFAREAH+AGKIVILHMPM PATGPFAWHPEL IEEL KRL+AAF+AVPYT
Sbjct: 58  IMPDTPHAAEFAREAHKAGKIVILHMPMDPATGPFAWHPELSIEELGKRLDAAFQAVPYT 117

Query: 121 AGINNHMGSRMTAQQPAMAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVF 180
           AGINNHMGSRMTAQ  AMAWLMA+LQRR+KFFVDSRTSAQTVAAAEAQKIGLA VSRDVF
Sbjct: 118 AGINNHMGSRMTAQPAAMAWLMAELQRRNKFFVDSRTSAQTVAAAEAQKIGLAHVSRDVF 177

Query: 181 LDDEPTEAAIFTQLQTAISLARKQGSAVMIGHPYPQTLAVLERELPKLKAQGIDWIDIQQ 240
           LDDE TEAAI TQLQTAI LA KQGS VMIGHPYPQTLAVLERELPKLKAQG+DWI+I+ 
Sbjct: 178 LDDERTEAAITTQLQTAIKLAHKQGSVVMIGHPYPQTLAVLERELPKLKAQGVDWINIKL 237

Query: 241 MISVRGNRATAAHGKDGQYR 260
           MISVR N+A A HGKDG YR
Sbjct: 238 MISVRSNQAMAGHGKDGIYR 257