Pairwise Alignments

Query, 265 a.a., Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase from Pseudomonas fluorescens FW300-N1B4

Subject, 255 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  343 bits (879), Expect = 3e-99
 Identities = 178/258 (68%), Positives = 205/258 (79%), Gaps = 7/258 (2%)

Query: 3   LRLLLGLLCCL-AGVAHAAPATTAATPAKAYLSLIIDDLGQNLLQDRRVLALPGPVTAAI 61
           +R LL LL CL AG+A AAPA       KAY+S+IIDDLGQ+  +D R LALPGPVT AI
Sbjct: 1   MRYLLCLLFCLMAGIAQAAPAN------KAYMSIIIDDLGQSPERDSRTLALPGPVTMAI 54

Query: 62  MPDPPHATEFAREAHRAGKIVILHMPMAPATGPFAWHPELPIEELEKRLNAAFKAVPYTA 121
           MPD PHAT+FAR+AH+AGK VILHMPM PATGP+AWHP + IEEL +RL+AA   VPY A
Sbjct: 55  MPDTPHATDFARQAHKAGKTVILHMPMDPATGPYAWHPGIAIEELARRLDAALVKVPYAA 114

Query: 122 GINNHMGSRMTAQQPAMAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFL 181
           GINNHMGSRMTAQ+  MAWLM +LQRRH FFVDSRTSA TVAAAEAQ   +A VSRDVFL
Sbjct: 115 GINNHMGSRMTAQREPMAWLMGELQRRHLFFVDSRTSAATVAAAEAQAHDVAHVSRDVFL 174

Query: 182 DDEPTEAAIFTQLQTAISLARKQGSAVMIGHPYPQTLAVLERELPKLKAQGIDWIDIQQM 241
           DD  T  AI  QLQ  I+LARKQGSAV+IGHPYPQTLAVLE ++P+LK  GI+ + +QQM
Sbjct: 175 DDVRTPEAIDAQLQQGIALARKQGSAVLIGHPYPQTLAVLESQIPRLKQLGIELVTLQQM 234

Query: 242 ISVRGNRATAAHGKDGQY 259
           I+ RGN+A  AHGK G+Y
Sbjct: 235 IATRGNQAMPAHGKHGRY 252