Pairwise Alignments

Query, 265 a.a., Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase from Pseudomonas fluorescens FW300-N1B4

Subject, 319 a.a., putative polysaccharide deacetylase from Escherichia coli BL21

 Score =  161 bits (408), Expect = 1e-44
 Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 4/212 (1%)

Query: 16  VAHAAPATTAATPAKAYLSLIIDDLGQNLLQDRRVLALPGPVTAAIMPDPPHATEFAREA 75
           +A AA    ++      L+++IDD G     + +VLA+P  ++ A++PD PHA E A +A
Sbjct: 9   LAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKA 68

Query: 76  HRAGKIVILHMPMAPATGP----FAWHPELPIEELEKRLNAAFKAVPYTAGINNHMGSRM 131
           H +G  V++H+PMAP +          PE+  +E+E+ + +A   VPY  GINNHMGS+M
Sbjct: 69  HNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKM 128

Query: 132 TAQQPAMAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDEPTEAAIF 191
           T+    M  +M  L+R + +F+DS T   T A   AQ  G+  + R VFLDD   EA I 
Sbjct: 129 TSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIR 188

Query: 192 TQLQTAISLARKQGSAVMIGHPYPQTLAVLER 223
            Q   AI LAR+ GS + IGHP+P T+ VL++
Sbjct: 189 VQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 220