Pairwise Alignments

Query, 596 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N1B4

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pectobacterium carotovorum WPP14

 Score =  468 bits (1204), Expect = e-136
 Identities = 242/587 (41%), Positives = 382/587 (65%), Gaps = 7/587 (1%)

Query: 1   MANSDQQSSMKIYLRLLKYVLPYWGAFALSIVGFVLFASSQPMLADMLKHFLDALQKPND 60
           M N    S+ + + RL   + P+    A++ +  ++ A+   ++  +LK  LD      +
Sbjct: 1   MLNDKDLSTWQTFRRLWPMISPFKAGLAVAAIALIINAAGDTLMLSLLKPLLDDGFGKAE 60

Query: 61  TKFLGVSLVLGVPLLIVLIAVYQGIGSFLGNYYLAKVARGVVHDLRCALFDNLLTLPNRY 120
                 ++++ +PL ++ + + +G+  F+ +Y +A V+  VV ++R  LF +++ +P  +
Sbjct: 61  R-----AVLIWMPLAVIGLMLMRGVSGFISSYCVAWVSGKVVMNMRRRLFSHIMGMPVSF 115

Query: 121 FDNNNSGHLISRITYNVTMVTGAATDAIKVVIREGLTVVFLFGYLLYSNWKMTLVLLAIL 180
           FD  ++G L+SRITY+   V  +A+ A+  V+REG +++ LF  + Y +W+++++L+ I 
Sbjct: 116 FDQQSTGTLLSRITYDSEQVAASASGALITVVREGASIIGLFILMFYYSWQLSIILIVIA 175

Query: 181 PVIAILVSSASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYEIERFHKASA 240
           P+++I +   SK+FR  SK +Q  MG VT    + ++G++ V  FGG+  E +RF + S 
Sbjct: 176 PIVSIAMRVVSKRFRNISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFDQVSN 235

Query: 241 DNMNRSLGMTRTQSIYTPMLQLVIYIGMAVLMYLVLY--LRGDASAGELVAYITAAGLLP 298
               + + +    SI  P++QL+  + +A ++Y   +  +    +AG +    ++   L 
Sbjct: 236 RMRQQGMKLVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALM 295

Query: 299 KPIRQLSEVSATIQKGLAGAESIFEQLDEEPEVDTGTKEMARVSGRLEVRNLSFQYPGTE 358
           +P++ L+ V+A  Q+G+A  +++F  LD E E DTG +E+ R  G LE R ++F YPG E
Sbjct: 296 RPLKSLTNVNAQFQRGMAACQTLFAILDMEQERDTGKREIERAKGELEFRQVNFAYPGKE 355

Query: 359 KIVLNDISFTAEEGQMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGMDVEEYKLTNL 418
            + L +I+     G+ VALVGRSGSGKST+A+L+ RFY    G+ILLDG D+ EY+L++L
Sbjct: 356 NLALKNINLHIPAGKTVALVGRSGSGKSTIASLLTRFYDIQSGEILLDGHDLREYRLSSL 415

Query: 419 RRHIALVTQQVTLFNDSVTNNIAYGDLAGAPFEDVRKAAEDAYAAEFIEQMPQGYDTLVG 478
           R  +ALV+Q V LFND++ NNIAY        E++ +AA+ A+A +FI +M  G DT++G
Sbjct: 416 RNQVALVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAHAMDFINKMDHGLDTVIG 475

Query: 479 ENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALEQVMKGRTTLVI 538
           ENGV+LSGGQRQR+AIARALL+++P+LILDEATSALDTESER IQAAL+++ K RT +VI
Sbjct: 476 ENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTAVVI 535

Query: 539 AHRLSTIEKADLILLMDQGRIVERGTHAELLALNGHYARLHEKDFVE 585
           AHRLSTIEKAD IL+++ GRI+ERG HA LLA NG YA+LH   F E
Sbjct: 536 AHRLSTIEKADEILVIEDGRIIERGNHAALLAANGAYAQLHRMQFGE 582