Pairwise Alignments

Query, 342 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 308 a.a., flagellar motor protein MotB (NCBI) from Escherichia coli BW25113

 Score =  218 bits (555), Expect = 2e-61
 Identities = 127/314 (40%), Positives = 185/314 (58%), Gaps = 28/314 (8%)

Query: 7   IIIKRVKKYAGGHHGGSWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPVGF 66
           I++KR K  + G   GSWKIA+ADF TAMMAFFLV+WL+S ++P++ I IA YF+ P+  
Sbjct: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68

Query: 67  SESGTPYI------IDLGGSPTLAPENTLNPEVKSQPQPDKVTIDSEQVEGMAEQVEKER 120
           + +G   I      I  GG      +     EV  QP           +E + +++E+ R
Sbjct: 69  AVTGGDRISNSESPIPGGGDDYTQSQG----EVNKQPN----------IEELKKRMEQSR 114

Query: 121 LELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIVDAENRPMFDSGSARLKPYFED 180
           L  L  +L   +E +P+L+  +  +  ++ Q+GLRIQI+D++NRPMF +GSA ++PY  D
Sbjct: 115 LRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRD 174

Query: 181 ILLAMADTIKAVPNKISISGHTDAKPY-SGTGDFGNWELSANRANAARRALIAGSYPDAQ 239
           IL A+A  +  +PN+IS+SGHTD  PY SG   + NWELSA+RANA+RR L+ G     +
Sbjct: 175 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGK 234

Query: 240 VARVVGYASSALFDRENPFNPVNRRIDIIVLTKKAQRAIEGSQGAEPAPVPTQGQGGPGE 299
           V RVVG A++       P + VNRRI ++VL K+A++AI   + AE    P      P  
Sbjct: 235 VLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAIL-HENAESQNEPVSALEKPEV 293

Query: 300 VP------APTADP 307
            P       P+A+P
Sbjct: 294 APQVSVPTMPSAEP 307