Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 273 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  140 bits (353), Expect = 3e-38
 Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 7/224 (3%)

Query: 34  HHHPWGTLEYSANGVLHMEIGSRRFMSPPQYAVWVPPGTEHSFYSNQPINYRAVC---LA 90
           H H  G L  + +G +   + +  +M PPQYAVW+P G EHS   NQ      +C   + 
Sbjct: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS---NQVTANAELCFLFIE 92

Query: 91  PALCRDLPQQACTLAISDILKAILKDFAARDVKIPEHDADKRLAQVLVDQLQQAPKHECY 150
           P+    +P   CTL IS + + ++   A R          +RL QVL D+L Q P+ + +
Sbjct: 93  PSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151

Query: 151 LPYASSPGLLGILEALQAEPGDNRPLAHWAAQIHVSERTLARQFVRELGMSFGEWRQRLR 210
           LP +S P +  ++E +   P +   L  WA    +SER LAR  V+E G+SF +WRQ+L+
Sbjct: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211

Query: 211 FLAAIEALDSQRSIQEIAFDMGYSTGSAFIAMFQRQAGCTPEQY 254
            + A++ L    ++Q++A  +GY + +AFI MF++  G TP +Y
Sbjct: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255