Pairwise Alignments

Query, 404 a.a., Integral membrane efflux protein from Pseudomonas fluorescens FW300-N1B4

Subject, 441 a.a., Probable NreB protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)

Query: 5   RNAQLIIAARLISDFGAFLNMVALATYVYLLS--NSAMSVGIFLASRVAGGIFASLIGTR 62
           R  + + AA++I+  G  L  VAL    Y L+  ++ + +G  LA ++   +  + +   
Sbjct: 8   RTYRHLFAAQVIALLGTGLATVALGLLAYDLAGDDAGVVLGTALAIKMMAYVGVAPVAAA 67

Query: 63  FYRRWAGRLPLIAFDLLRAGLLGLLLVLPVTQQALLLPLIAFGLGFGNSMFAIGLNSQLP 122
           F   +  R  L++ DL+RA +    L+LP   Q   + ++ F L   ++ F     + +P
Sbjct: 68  FASSFPRRAVLVSLDLVRAAVA---LLLPFVTQIWEVYVLIFVLQAASAAFTPTFQATIP 124

Query: 123 HMI-DKAQLLKTNAWMTSASSAAMVGGSLVAGLLVAGFGFETVFALNVATYLLAALLIVP 181
            ++ ++    K  +    A     +   ++A  L+   GF  +FA  V  +L +A L+V 
Sbjct: 125 DVLPEEKDYTKALSLSRLAYDMESLVSPMLAAALLTVIGFHDLFAGTVLGFLASAALVVS 184

Query: 182 LRFPR-PAPSDEPHHQQGEWSALRQGLR---TAPVLAAMLAVAMADTLGSAAHNVGFPII 237
           +  P+ PAP      ++G +    +GLR     P L  +LA++ A     +   V   +I
Sbjct: 185 VALPKNPAP-----ERRGIYDRTTRGLRIFLATPRLRGLLAISAAVAAAGSMVFVNTVVI 239

Query: 238 SKL---LTPESASTTLGMMLAVWASGKFIGARVASRLKGTDNVHLERRFFFGVLLMSCGF 294
            +    LT +S    + + LA++ +G  + A    RL   D +        GV L+  G 
Sbjct: 240 VQANMGLTQKS----VALALALFGAGSMVAALGLPRL--LDKLSDRVAMIAGVALLVAGL 293

Query: 295 ILMFQQQTLYGLLLFSLPAGLG 316
            +  Q  +  G L+     GLG
Sbjct: 294 GIGTQVASYTGTLMLWFVMGLG 315