Pairwise Alignments

Query, 278 a.a., AmpE protein from Pseudomonas fluorescens FW300-N1B4

Subject, 276 a.a., Inner membrane protein AmpE from Pseudomonas putida KT2440

 Score =  373 bits (958), Expect = e-108
 Identities = 190/277 (68%), Positives = 217/277 (78%), Gaps = 2/277 (0%)

Query: 1   MSFLVLLLAVWIEKFSALRHQVQRDGGWVRELNKLEANPRMTNRPWLILVVLVLLPVALL 60
           MSFLVLLLA+W+EKFSALRHQVQRDG ++ EL +LE N ++   PW  L +LVL PVALL
Sbjct: 1   MSFLVLLLALWVEKFSALRHQVQRDGFFIGELVRLERNGKV--HPWWTLAILVLAPVALL 58

Query: 61  GLLLVVLEPVAYGLLALPVHLLVVIYSLGRGDLLAGLGPFRDAWRREDLQAAAHVAKRDL 120
            LLL VLEPVAYGLLALPVHLLV+IYSLGRGD  A LG FRDAWRR D QAA H A+RDL
Sbjct: 59  VLLLHVLEPVAYGLLALPVHLLVLIYSLGRGDAKASLGAFRDAWRRGDDQAALHAAERDL 118

Query: 121 NICADSGEQLLERVEGHLLWQAYQSFFAVIFWYFLLGPVAALSYRLLALAEEHGQNPAVV 180
            + AD    LL RV+G+LLWQ YQ FFAVIFWYF+LGP AAL+YRLLAL  EH + PA+ 
Sbjct: 119 GLVADEPHSLLVRVQGNLLWQVYQGFFAVIFWYFVLGPGAALAYRLLALCSEHSKQPALK 178

Query: 181 ERAAQLRHAFDWVPVRLLAASFALVGNFVAVGRVMLHELLNWNISAAQLIEKVGLVAGEI 240
            RA QLRH  DW+PVR LA SFALVGNF+AV RVMLHE+LNW+ISA  L+ +VG +A +I
Sbjct: 179 ARAEQLRHIMDWLPVRALALSFALVGNFLAVTRVMLHEVLNWHISAGHLVARVGRIADDI 238

Query: 241 PAPMVGPDGINSLDRIWELLLRAAVLWYAGFALWTVL 277
           P       G+  LD +WELLLR AVLWYAGFALWTVL
Sbjct: 239 PEEEDSQRGLGRLDSLWELLLRCAVLWYAGFALWTVL 275