Pairwise Alignments

Query, 648 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens GW456-L13

Subject, 766 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  135 bits (340), Expect = 7e-36
 Identities = 132/448 (29%), Positives = 198/448 (44%), Gaps = 45/448 (10%)

Query: 224 EQAERSEKLRVESYQDSLTGLANRRYFEMQLNARVSNPEQASSGYL--LLLRVKDLAGLN 281
           E+  +  +L   ++ D+LTGL+NR +F  QL   V    +AS  ++  LLL +     +N
Sbjct: 311 EEKAQQRRLEFLAHNDALTGLSNRSWFGHQLEQAVQEA-RASGEFIAVLLLNLDRFKDVN 369

Query: 282 QRLGGQRTDDVLKAVGEQLSRECAKYPETQNLVTRIRGGEFAVLAPGLVREE-ALQLAQN 340
              G    D+VLK +  Q+  + A  P   +++ R+ G E AV+A  L   + A  +A++
Sbjct: 370 DSYGHTIGDEVLKHIARQV--QSALRPG--DVLGRMAGDELAVVARHLRHADGAAAMARH 425

Query: 341 LDSALAS-LHATGATDVAAVASIGLAPFV-HGDSPQTVLSLGDQALAQAEGQGEQNWACI 398
           L  A+A    +    +V A  S+G+  F  H  + + +L     A+  A+ +G   W C 
Sbjct: 426 LIRAVAEPWRSPDGLEVVAGVSVGICMFPDHAHTTELLLQGAHAAVYGAKARGRGAW-CF 484

Query: 399 EHSLSASVGDDHHAWHRMLDQALTQRRFELYFQPVVAAQDTQLVLHYKVLSRLLDEHGQT 458
            H        +       L  AL Q   ++Y+QP V    T  +L  + L R  D     
Sbjct: 485 FHEAMTQAARERLELESRLRLALMQGHLQMYYQPQVDIA-TGRILGAEALVRWNDPQEGL 543

Query: 459 IPAGRFLPWLERFGWTARLDRLMLERVLAQMSEHEES------LALNLS----------- 501
           I   RF+P  E  G    L   +L  V  Q  E  ++      LA+N+S           
Sbjct: 544 ISPARFIPVAETSGVIGPLGEWVLREVCRQGQEWRDAGLPELMLAVNVSPRQFHLTDLAG 603

Query: 502 --SATLGDPQAQNRIFEILRAHSNLGPRLTLEIGEEQLPDQAV-LEQLTRRLRELGFSLS 558
             SA L D     R+ E             LEI E  L ++     Q+  RLRELG  ++
Sbjct: 604 CASAALADSGFPARLLE-------------LEITETALAERTEEARQVLVRLRELGLRIA 650

Query: 559 LQRFGGRFSMIGNLARLGLAYLKIDGSYIRSIDLESDKRLFIEAIQRAAHSIDLPLIAER 618
           +  FG  +S +  L R  +  LKID  +IR I    D      AI    HS+ L ++AE 
Sbjct: 651 VDDFGTGYSSLAQLKRFPIDVLKIDQGFIRDIPQSEDDMAISAAIIAMGHSMGLSVLAEG 710

Query: 619 VETEGELSVIREMGLYGVQGQLFGEPKP 646
           VETEG+L+ +RE G    QG L   P P
Sbjct: 711 VETEGQLAFLRERGCDTYQGYLCSRPVP 738