Pairwise Alignments

Query, 700 a.a., Potassium efflux system KefA protein / Small-conductance mechanosensitive channel from Pseudomonas fluorescens GW456-L13

Subject, 275 a.a., hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 24/260 (9%)

Query: 444 LLFAWLIWILSD------TAVHHALTRSRKGLANARAQTMMPLIRNVLFIAIFIIALIVA 497
           +LFA +I+ +          V H L  SRK        T++  + N+ +  +F+  +I  
Sbjct: 22  ILFALVIFFVGKYFAGVAQKVVHKLLNSRKV-----DPTVVSFVANLSWAVVFVFTIIAT 76

Query: 498 LANMGMNVTPLLAGAGVIGLAIGFGAQSLVADLITGLFIIIEDSLAIDDYVDVGGHLGTV 557
           L  +G+    L+A  G  GLA+G   Q  +++  +G+ +++     + DY++  G  GTV
Sbjct: 77  LGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIAGTV 136

Query: 558 EGLTIRTVRLRDIDGIVHTIPFSEIK--SIKNYSREFGYAI-FRVAVPANMDIDNAIKLM 614
           + +TI + +LR  D  V   P S I   +I NYS      I   + V  + D+    K++
Sbjct: 137 DEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVICVSYSADLAQTKKVL 196

Query: 615 REVGQKMRTDPLQRRNIWSPLEFQGVESFESG--NAILRARFKTAPIKQWEVSRAFNLSL 672
            E+          +  +  P    G+    S   N ++R   KTA    W         +
Sbjct: 197 TEILDN------NQYVLKEPGYTVGLSELASSSINFVVRPWVKTA--DYWTARFEILEQI 248

Query: 673 KRHMDEAGLDLATPRMSVHI 692
           K  +D A +++  P+M +H+
Sbjct: 249 KNALDAADIEIPFPQMDIHV 268