Pairwise Alignments

Query, 612 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens GW456-L13

Subject, 679 a.a., Fis family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score =  380 bits (975), Expect = e-109
 Identities = 242/642 (37%), Positives = 346/642 (53%), Gaps = 49/642 (7%)

Query: 13  IIQDSWSRCRAFGLSHQSTPAFDPLPAAGIAQLLESQHSLVQTTHQEVLPYYENILSNSN 72
           +I  +  R  ++GL    +P F P+    +   +E   SL       +   Y+ I+ N+ 
Sbjct: 30  LIAQAHQRSESYGLRPYESPDFCPVLQNELKTQIERSQSLFTYALPVMETLYDQIV-NTQ 88

Query: 73  CLIMLADHQGQVLTSWGTQRFIEPKLARGFSAGASWMERCTGTNAIGTALACEQAVHIEH 132
            +++L D  G +L S G   F+          GA W E   GTNAIGTALA  +A  +  
Sbjct: 89  SMVILTDAAGLILHSLGDDDFLAKASKVALQPGALWSEESRGTNAIGTALAENKATLVHG 148

Query: 133 DEHFLKANRFMTGSAAPIFDTERKVIAVLDVSSDSYLPPSHTLGMVKMMSQTVENRLILN 192
            EHFL+ANRF+T S  PI D   K +  LDV+ D      HT+ +V+M +Q +EN+L  N
Sbjct: 149 AEHFLEANRFLTCSCMPILDAYGKTVGALDVTGDQRGFHKHTMALVRMSAQMIENQLFAN 208

Query: 193 LFHGQHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLGISLSRV---SVESL 249
            F      + F++    + +   G+  F   G+ LSANR A   LG+S++ +   +  SL
Sbjct: 209 AFQDM-VCVRFHSRAEFIGTLVEGIASFTPGGRFLSANRSAQFQLGMSVAALHAHTFSSL 267

Query: 250 FKVSLLELLNQ----PEG-----LPFSLQASGRNRFQC---------LLKRPKQVPIQPR 291
           F  SL +L +     P G     LP  ++ S R  ++          + +   Q   +P 
Sbjct: 268 FGQSLSQLFDAERKAPGGVVYLPLPSGVKVSARIEWKAPAASVPAVAIDRGSAQAQSRPE 327

Query: 292 VFAEPAVTAPTPAAISLNTLHFGDIRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKA 351
               P   A  P    L+ L  GD +++  + +  +++ KDIP+++ GETG GKE+  +A
Sbjct: 328 ATCLPHRAATQPTQPGLDDLDTGDAQIQGVITKLRKVIGKDIPVMVLGETGTGKELLARA 387

Query: 352 LHQASSRSKQAFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLD 411
           +H  S R    FIAVNCA+IP  L+ESELFGYE+GAFTGA +KG IG +  A+ GTLFLD
Sbjct: 388 IHADSPRHAGPFIAVNCASIPETLIESELFGYEEGAFTGARKKGGIGKMLLANGGTLFLD 447

Query: 412 EIGDMPLPTQARLLRVLQERCVQPVGSSELFPVDLRIISATNRSLREQVQLGRFREDLYY 471
           EIGDMPL  QAR+LR LQER V P+GSS++  VD+ +I ATNR++REQV  G FREDLYY
Sbjct: 448 EIGDMPLHLQARMLRALQERAVTPLGSSKVIHVDVSVICATNRNMREQVANGLFREDLYY 507

Query: 472 RIGGLTLELPPLRERSDKEALFKRLWEQHREPSQWAGLSREVLELFERHPWPGNLRQVSS 531
           R+ GL + LP LRERSD + +  +L  +  + S    +   V+ +F  + WPGN+RQ+ +
Sbjct: 508 RLNGLVVRLPALRERSDLDVVANKLLRE-GQASGGPRIKDSVMAMFRSYHWPGNIRQLGN 566

Query: 532 VMQVALAMAE-EQPIRPEHLPDDFFVDL----------------------EMEPVETPEP 568
           +++ A  MAE E  I  +HLPDDF  D                       E      P  
Sbjct: 567 LLRTARLMAEGEAEITEDHLPDDFLEDRLARQATHPAHGATVAPDAAPDGERAAGAAPRA 626

Query: 569 LTVDLNDVEDLN--RQLQAAGGNISYLARRLGVSRNTLYKRL 608
               L DVE L     ++A  GNIS  A+ LG+SRNT+Y++L
Sbjct: 627 QPTRLADVEALAIVAAVKAHHGNISAAAKALGISRNTVYRKL 668