Pairwise Alignments

Query, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 918 a.a., Sensor histidine kinase/response regulator from Pseudomonas sp. S08-1

 Score =  294 bits (752), Expect = 2e-83
 Identities = 247/841 (29%), Positives = 406/841 (48%), Gaps = 57/841 (6%)

Query: 122 VQYLDFYLLR-DGQLE-QHTATGELRPLSARPLPNRAYLFSLPNDGQPREAYIRLQSSHP 179
           + ++D YL   DG L+ QH+  G+    + RP+  R + F L          +R++S+  
Sbjct: 103 LDHIDVYLQDGDGNLQRQHS--GDSFAFAQRPVQVRHFWFPLTLPHGSNTVLLRVESTST 160

Query: 180 VMT--WFKTIDDSGLVSQTKPAYLFGALFGALALLMVYNLLRFAYTLSYTHIWLSLLHGA 237
           +    +F T   S   +Q     + GA +G L  + +YNL  F       + W  + +  
Sbjct: 161 IFVPLFFSTYGASA-AAQENLMGINGAFYGVLFAMFIYNLFLFISLRERAYFWYLVYNVN 219

Query: 238 LLVCAVANLGVLAVWLPGLTYSQPLIADLAALLASTALLGYTLGFFH---HRGRTWITWL 294
           + + A    G+L   LP     Q +   +   L       ++  F H   H  R      
Sbjct: 220 VGLFAACFDGMLFKLLPNSVGLQSVSIYVLMFLHCLTAAQFSRHFLHIPQHFPRLD---- 275

Query: 295 LGLEFNLILALAGSIL----LGQWPWYSWLIYSMGLVA-SFSVLFVALYHWRQGYQPARL 349
            GL   L+L + G +L    +G   W   ++ S+ ++  S  +L   +Y WR+G +    
Sbjct: 276 KGLRL-LMLVIVGCLLSVPLIGLAAWN--ILASVAVLGISLILLLTGIYAWRRGVRHGSY 332

Query: 350 VVAGLTLFNSGMVFFMPMLLGFDQLDPGWLTGGLFSLA--TLGGLLLSFALLERQRQLQS 407
            V   ++    +V FM +  G   L+   + G        T+  L LS  L +R   L+ 
Sbjct: 333 YVLAWSVL---LVAFMLVTSGSLGLEIFGIYGSAVVKVGVTIELLSLSIGLADRINLLKE 389

Query: 408 DSRTQYTAEAVTSAELKTKADFLSKISHELRTPMNGVLGMSELLLGTSLSAKQRDYVQTI 467
           +      A      E + K  FL+K+SHE+RTP+NGVLGM +LL  T L   QR YV TI
Sbjct: 390 EGFRSRQAAEQAEYENQAKGRFLAKMSHEIRTPLNGVLGMLQLLRETPLERNQRFYVDTI 449

Query: 468 HSSGNELLNLINEILDISKLESGQIELDDVQFDFNALIEDCLSIFRAKAEQQKVELISFI 527
            SSG+ L+ +IN+ILD +++ESG++ L++++FD   ++ + +++F A+A ++++ L   +
Sbjct: 450 SSSGSSLMAVINDILDYARIESGKLSLEEIEFDLEQMVSETMALFTAQALEKRLRLYVSL 509

Query: 528 QPQLPQVVAGDPTRLRQTLLNLLENAFKQTDEGEV-LLIAAVDGPQDNPRLRITVQDSGR 586
           +  +P+ V GDPTRL+Q L+NLL NA K T EG V L ++     Q    L   V DSG 
Sbjct: 510 EGGVPRRVRGDPTRLKQVLMNLLGNALKFTQEGHVALTLSRRSDSQGQQHLVFAVSDSGI 569

Query: 587 PLEPYERDALLNAAVDSHDFLASTRHGGR-LGLIIARQLVQLMDGDFGIQTGTTQGNTLW 645
            +       L  +     D   + R+GG  LGL I+++LV++M G   +Q+   QG+   
Sbjct: 570 GIHDDSLTQLFKSFAQG-DSSTTRRYGGSGLGLAISKELVEMMGGRIEVQSTPGQGSRFA 628

Query: 646 ISLPLASEGLAQNNADLDGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEVSAVASGKEAL 705
             +PL +    ++  DL   L+    L+   +      L      WG+        +   
Sbjct: 629 FDIPLRAATAGED--DLATLLENRIALLCSLDGQGLDCLGHLLGRWGMRTQRCQDPE--- 683

Query: 706 ALLRTKAHLREYF--DVVLLDQDMPGMTGMQLASKIKEDSSLNHDILLIMLTGMGSAPS- 762
              R + +L ++    +++L    PG +G  L S ++        +LL+      S P  
Sbjct: 684 ---RLQDYLEDFATPPLLVLMSPWPGSSGHWLDS-LRPHLQQGQRVLLL------SPPEQ 733

Query: 763 -KIIARNAGIKRI-LAKPVAGYTLKTTLADELAQRLQSSQLRPALASPPLAPLEVPSDFR 820
            + +  + G++ + LA P++   L+ TL +  ++R Q S      A PP       +   
Sbjct: 734 HQQLPESQGLRLLHLALPLSVTGLRDTLLELYSERRQESP-----AQPPALDQRSGNTPC 788

Query: 821 ILVAEDNNISTKVIRGMLNKLNLQPDTACNGEEALEAIKTQP--YDLVLMDCEMPVLDGF 878
           ILVAEDN ++  V++G L K         +G+ A++  +  P    L+LMDCEMP LDGF
Sbjct: 789 ILVAEDNRVNQMVVQGFLRKRGYSVRMVADGQSAVDEYRRDPNAIQLILMDCEMPELDGF 848

Query: 879 QATQQLREWEARNGRSRTPVVALTAHILSEHRERAREAGMDGHMAKPVELSHLRELIDHW 938
           +AT+Q+R  EA    S  P+VALTAHIL EHR+R   AGM+  + KP++   L  L+D +
Sbjct: 849 EATRQIRRLEASRHLSAVPIVALTAHILDEHRDRGMAAGMNEFLGKPLDCQQLYALLDRY 908

Query: 939 V 939
           +
Sbjct: 909 L 909