Pairwise Alignments

Query, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  249 bits (637), Expect = 6e-70
 Identities = 176/563 (31%), Positives = 303/563 (53%), Gaps = 36/563 (6%)

Query: 388  TLGGLL-LSFALLERQRQLQSDSRTQYTAEAVTSAELKTKADFLSKISHELRTPMNGVLG 446
            ++GG++ L+  + E   Q +   + +  AE  +    K K++FL+ +SHE+RTP+NGV+G
Sbjct: 657  SIGGIMMLTQDITESCLQREELKKAKILAEQAS----KAKSEFLANMSHEIRTPLNGVIG 712

Query: 447  MSELLLGTSLSAKQRDYVQTIHSSGNELLNLINEILDISKLESGQIELDDVQFDFNALIE 506
             ++L+L T LS  Q  Y+  ++ SGN LLN+IN+ILD SK+E+G++ELD  + D   L E
Sbjct: 713  FTDLVLKTDLSETQAQYLSIVNQSGNALLNIINDILDFSKIEAGKLELDIDRCDLYELTE 772

Query: 507  DCLSIFRAKAEQQKVELISFIQPQLPQVVAGDPTRLRQTLLNLLENAFKQTDEGEV-LLI 565
                I   +  ++ +E++  I P +P+ +  D  R++Q ++NLL NA K T+EGE+ L +
Sbjct: 773  QTSDIITYEVHKKGLEMLLNIHPDIPRFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQL 832

Query: 566  AAVDGPQDNPR--LRITVQDSGRPLEPYERDALLNAAVDSHDFLASTRHGGR-LGLIIAR 622
              +D  + +    +R +V+D+G  ++  E+   +  A    D   + ++GG  LGL I+ 
Sbjct: 833  YPIDKDEASREMVIRFSVRDTGIGIKA-EKQTKIFEAFSQEDVSTTKKYGGTGLGLTISN 891

Query: 623  QLVQLMDGDFGIQTGTTQGNTLWISLPLASEGLAQNNADLDGPLQGTRLLIVDDNDTCRK 682
            +L+QLM     + +   +G+T +  L +  E        L+  L    +LIVDDND  R 
Sbjct: 892  RLLQLMHSGLQLHSTVGKGSTFYFDLNVKYE--YGERITLEEDLSVENVLIVDDNDNNRM 949

Query: 683  VLVQQCSAWGLEVSAVASGKEALALLRTKAHLREYFDVVLLDQDMPGMTGMQLASKIKED 742
            ++ +  +  G+  S   +G EA+     K    E FDVVL+D  MP M G++   KI+E 
Sbjct: 950  IIERMMALRGISTSQAKNGFEAI----QKFVEGEKFDVVLMDYHMPYMNGIETIRKIREI 1005

Query: 743  SSLNHDILLIMLTGMGSAPSKII--ARNAGIKRILAKPVAGYTLKTTLADELAQRLQSSQ 800
                 D   I+     S   KI+   +  G+++ L KP+        + D L    +   
Sbjct: 1006 V----DRQPIIFLHSSSDDDKILKACKELGVRKKLVKPIK----LQEMYDALLSINKKQD 1057

Query: 801  LRPALASPPLAPLEV-PSDFRILVAEDNNISTKVIRGMLNKLNLQPDT----ACNGEEAL 855
             R A       P  + P+D ++L+ EDN I+  + + +++  NL P T    A NG+EAL
Sbjct: 1058 YRKATDQNIDLPKNLFPNDGKVLIVEDNTINMLLAKTVIH--NLSPATAILEAANGKEAL 1115

Query: 856  EAIKTQPYDLVLMDCEMPVLDGFQATQQLREWEARNGRSRTPVVALTAHILSEHRERARE 915
            E +K +   ++ MD +MP ++G++ATQ +R+   +  +    ++ALTA  +   RE+  +
Sbjct: 1116 EVMKDELPSVIFMDVQMPEMNGYEATQAIRK---KYNKHNILIIALTAGNIKGEREKCMQ 1172

Query: 916  AGMDGHMAKPVELSHLRELIDHW 938
            AGM+  +AKP     + +L++ W
Sbjct: 1173 AGMNDFIAKPFVEEDVIKLMEKW 1195