Pairwise Alignments

Query, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  238 bits (606), Expect = 2e-66
 Identities = 161/524 (30%), Positives = 278/524 (53%), Gaps = 27/524 (5%)

Query: 424  KTKADFLSKISHELRTPMNGVLGMSELLLGTSLSAKQRDYVQTIHSSGNELLNLINEILD 483
            + K++FL+ +SHE+RTP+NG++G S+L+L T L+ +Q  Y+  ++ S N LLN+IN+ILD
Sbjct: 535  RAKSEFLANMSHEIRTPLNGIIGFSDLVLKTELNDRQEQYLSIVNQSANSLLNIINDILD 594

Query: 484  ISKLESGQIELDDVQFDFNALIEDCLSIFRAKAEQQKVELISFIQPQLPQVVAGDPTRLR 543
             SK+E+G+++LD  ++D   L+E    I      Q+ +E++  I P +P+    D  RL+
Sbjct: 595  FSKIEAGKLDLDIERYDLYELVEQASDIITYVIHQKGLEMLLNISPNIPRFAWIDSVRLK 654

Query: 544  QTLLNLLENAFKQTDEGEV-LLIAAVDGPQDNPR--LRITVQDSGRPLEPYERDALLNAA 600
            Q L+NLL NA K TD+GE+ L +  +     N    +R +V+D+G  ++  ++D +   A
Sbjct: 655  QVLVNLLGNASKFTDKGEIELKLTPLSNSNKNGEMDIRFSVRDTGIGIKSEKQDKIFE-A 713

Query: 601  VDSHDFLASTRHGGR-LGLIIARQLVQLMDGDFGIQTGTTQGNTLWISLPLASEGLAQNN 659
                D   + ++GG  LGL I+ +L+QLM     + +   +G+T +  L +  E      
Sbjct: 714  FSQEDVSTTKKYGGTGLGLTISNRLLQLMGSKLQLTSTPNRGSTFYFDLRIKCED--GQA 771

Query: 660  ADLDGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEVSAVASGKEALALLRTKAHLREYFD 719
              L+G     ++LIVDDN   R ++ +  +  G++     +G EA+  L       E +D
Sbjct: 772  IPLEGEPNLHKILIVDDNANNRMIIERMLALKGIQTVQAKNGYEAIQRLVD----GEEYD 827

Query: 720  VVLLDQDMPGMTGMQLASKIKEDSSLNHDILLIMLTGMGSAPSKIIARNAGIKRILAKPV 779
            V+L+D  MP + G+  A KI+  ++     ++ + +        + ++   I   L KP+
Sbjct: 828  VILMDFQMPYLNGIDTARKIR--ANFKEQPIIFLHSSSEDKTISLASKELSIPHRLIKPI 885

Query: 780  AGYTLKTTLAD-ELAQRLQSSQLRPALASPPLAPLEVPSDFRILVAEDNNISTKVIRGML 838
                +   L   +   R         L +PPL    +     IL  EDN I+  + + ++
Sbjct: 886  KMQDMYDALLKIKHNNRKGKEPKEKRLYAPPL----LTEKSSILFVEDNAINMLLGKTVI 941

Query: 839  NKLNLQPDT----ACNGEEALEAIKTQPYDLVLMDCEMPVLDGFQATQQLREWEARNGRS 894
            +  N+ P T    A NG++ALE +K    D++ MD +MP ++G++AT+ +R+ E +N   
Sbjct: 942  H--NISPKTTVLEASNGKQALELLKVNLPDMIFMDVQMPEMNGYEATKIIRK-EYKN--K 996

Query: 895  RTPVVALTAHILSEHRERAREAGMDGHMAKPVELSHLRELIDHW 938
               + ALTA  L   +E+  EAGMD  +AKP     L  L++ W
Sbjct: 997  NLLIFALTAGNLKGEKEKCMEAGMDDFIAKPFVEEDLIRLLEKW 1040