Pairwise Alignments

Query, 299 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

Subject, 315 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 16/305 (5%)

Query: 2   VVVLAILPIFGLISLGYLFGWRQWLGNEGAAGLASVTFKLFMPAVLFSGIARAELSD--- 58
           +++  +LPI  LI+LG     R +L      G   +++ + +P++   G+A A L     
Sbjct: 14  LLLTTLLPIILLIALGTFLRLRGFLAESFWPGAERLSYYVLLPSLFLHGLATANLDGIPV 73

Query: 59  -GMSPMLLLAYFVPVLLVFLLVNAIAHQRAGRATPLGLTAAYSNNVLVGIPLVTTLLGAE 117
            GM+  L+L+     +L+ L   A  H+ A   +       ++N   +G  L   + G+ 
Sbjct: 74  LGMAGALMLSTLAGAVLLMLYQGAANHEGADFTSVFQGGIRFNN--YIGATLAAGIYGSA 131

Query: 118 SL----VYVFAILVFHSLVLFSLQSFYAALGDGDKVSVPALLKNLANPLIIGLLLGALLN 173
            +    V   AI+   +L+   + + ++A        + A+    ANPLI+G   G +L 
Sbjct: 132 GIALAAVANAAIVPLVNLLCVLVFARFSARHSSPATVLRAI---FANPLIVGCAGGLVLR 188

Query: 174 VSGLELPEPLWRVAGWLAQAALPCALMVLGISLSRYRL-RPSGSVLLLTLIKLALFPALV 232
            +GL LP  +      L QAALP  L+ +G +L    L +    ++  +  K  + P   
Sbjct: 189 ATGLGLPAGIDATVKALGQAALPLGLLCVGAALGGASLGQQVRPLMAASAFKFLVMPLTT 248

Query: 233 WWLSGLLPGLNADARNVLVLLAACPSGVNVLAFVKHSEDTRAVSST-VFLSTVMAVISLP 291
           W +  L  GL+  A  V VL  A P+  +     +       + +T + L TV A  +LP
Sbjct: 249 WGVCRLF-GLSGQAAVVAVLFQALPTASSSYVMARQMGGNAPLMATLIALQTVAAAATLP 307

Query: 292 LWMLL 296
           L ++L
Sbjct: 308 LVLML 312