Pairwise Alignments

Query, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  299 bits (766), Expect = 1e-85
 Identities = 186/472 (39%), Positives = 267/472 (56%), Gaps = 31/472 (6%)

Query: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63
           +L+++DE  IR  L   L R   +V   G+V EA+   +   +DL  +D+RLP   G E+
Sbjct: 6   VLVIDDERDIRELLTITLGRMDLQVDAVGTVAEARRALAERSYDLCFTDMRLPDGTGHEI 65

Query: 64  IKLAEGT----PVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119
           I+L        PV ++T+Y ++ +AV+++K GA D+++KP D  +ML+ + R        
Sbjct: 66  IELIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDI-QMLRGLVR-------- 116

Query: 120 AAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESGTGKE 179
            A++    R + A AA +G D   +IG  + MQ +   I K+A   + V I GESG GKE
Sbjct: 117 TALRLAEERRSGAAAAKTG-DSSRLIGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKE 175

Query: 180 LVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGT 239
           LVAR +H    RA  P + VNC AIP  L+ESE FGH KG+FTGAS  + GL +AA GGT
Sbjct: 176 LVARLIHEQGPRASGPFVPVNCGAIPSELMESEFFGHRKGSFTGASTDKEGLFQAAQGGT 235

Query: 240 LFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTGQFRE 299
           LFLDE+ ELPL  Q +LLR +QE  +R +G      VD R+++ATH++L  L + GQFR+
Sbjct: 236 LFLDEVAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQ 295

Query: 300 DLYYRLHVIALKLPPLRERGSDVLE----IAKAFLARQGERMGSDDLHFSRDAEQAIRHY 355
           DL+YR++VI L++PPLRER  DV +    I KA   + GE +G      S  A  A+  Y
Sbjct: 296 DLFYRINVIELRVPPLRERRGDVSQLSAFILKALAGKSGESVG----QLSPSARGALEAY 351

Query: 356 SWPGNVRELENAIERAAILSESPEIDAELLGIDIELDELDDDFDEPLGSIRGIANSNEPT 415
            +PGNVRELEN +ERA  + +   I+A  L +         +   P G     A +    
Sbjct: 352 DFPGNVRELENILERAMAMCDGSTIEAADLMLPQRSARPSHEPAAP-GQPSAPAAAASTG 410

Query: 416 EDLSLEDYFQHF-------VLEHQDHMTETELARKLGISRKCLWERRQRLGI 460
            D  L+DY  +         LE +    +T  ARKLGI+ + L  + ++LGI
Sbjct: 411 ADGGLDDYISNLERTAIVKALE-ESRYNKTAAARKLGITFRALRYKLKKLGI 461